| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1865 |
|---|
| Symbol | |
|---|
| ID | 4842701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 2165176 |
|---|
| End bp | 2166285 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640119086 |
|---|
| Product | ribonuclease D |
|---|
| Protein accession | YP_001050240 |
|---|
| Protein GI | 126174091 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0349] Ribonuclease D |
|---|
| TIGRFAM ID | [TIGR01388] ribonuclease D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000800647 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCAGCGT TTCAATATGT GAGTGATGAA GCAAGCCTTA ATGCCCTCGT TGCCCAATAT
AAACAGAGTA AGATACTCGT GTTAGATACC GAGTTTGTTC GTACTCGTAC TTATTATGCC
AAGTTAGGTT TGATCCAAGC CTATGATGGT AAAACCTTAG CTTTGATTGA TCCGGTGGCT
TTACCTGATT TAGCCCAGTT TTGGGCGCTG TTATCGGACC CGAATATCGT TAAGCTTGTG
CATTCCTGTA GTGAAGACTT AGAAGTCTTT GCCCACTACG GTAAATGTCA GCCTACGCCT
TTATTTGATA GCCAAATTGC CGCCTCTTTG TGCGGTATGG GCCATGGTGT GGGTTATGCC
AAGTTAGTTG AAACTTGCTT GGGTGAAGTG ATCGATAAAG GCGAGTCGCG TACAGATTGG
ATCCGTCGTC CTTTAACGGA AGCCCAGTTA AGCTACGCCG CTAATGACGT CTTGTACTTG
TATCAGCTCT ATCCTCAACT GGAAGCGAAA CTCAGCGCCC AAGGCCGTTT AGCTTGGTTA
TACGAGGAAG GGGAAAGGAT GACCCTGGGC AGGCTTGCAG ATCCTGATCT CGACACGGCT
TATTTGAAAG TGAAAAATGC TTTCCAACTG ACCGAAATCC AATTGGCTTA CCTTAAAGTG
CTTGCTAAGT GGCGTCTTGA AAAAGCCTTA GTGCGTGATT TAGCCCTAGG TTTTGTGGTC
AAAGATCATG GTCTTATCGC ATTAGCGAAG AAGCAACCTA AATCCTCGGC TGACTTGTTT
AAGCTCAATG ATTTGACTGA GCAAGAAAAA CGTATCCACG GCAAAGATCT ATTACGTGTG
TTGCAAACCG CTGATTTGGT CAATTTACCC GAGTTAGTGG ATGTGCTGGC GTTGAAGTCG
GGTTATAAAT CGGCCTTTAA GGCGATTAAA AGCTGCTTAG TCGAGTTGTG TGAACAGCAT
GATGTGCCGC AGGAAATGCT CGGTTCTAAA CGCCATATCC ATGAGTTTTT GCAATGGCGT
TGGGATAAGC AACAAGGGGA TTTGCCCGCG GTGTTATGCG GATGGCGGGG CGAGATTGCC
GCTGAGTCCC TAGCTAAGCT TGAGGTCTAA
|
|---|
| Protein sequence | MSAFQYVSDE ASLNALVAQY KQSKILVLDT EFVRTRTYYA KLGLIQAYDG KTLALIDPVA
LPDLAQFWAL LSDPNIVKLV HSCSEDLEVF AHYGKCQPTP LFDSQIAASL CGMGHGVGYA
KLVETCLGEV IDKGESRTDW IRRPLTEAQL SYAANDVLYL YQLYPQLEAK LSAQGRLAWL
YEEGERMTLG RLADPDLDTA YLKVKNAFQL TEIQLAYLKV LAKWRLEKAL VRDLALGFVV
KDHGLIALAK KQPKSSADLF KLNDLTEQEK RIHGKDLLRV LQTADLVNLP ELVDVLALKS
GYKSAFKAIK SCLVELCEQH DVPQEMLGSK RHIHEFLQWR WDKQQGDLPA VLCGWRGEIA
AESLAKLEV
|
|---|
| |