| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1852 |
|---|
| Symbol | |
|---|
| ID | 4845696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 2151532 |
|---|
| End bp | 2152479 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640119073 |
|---|
| Product | DNA ligase |
|---|
| Protein accession | YP_001050227 |
|---|
| Protein GI | 126174078 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1793] ATP-dependent DNA ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0107738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATA TCAGCCCGTT ACAAGATTTA ACATTTCATC GTTTTATCCG CTTTCGGTTT
TTCAAACAAC GTCTGCTCTT ACTCAGTCTG CTAATATTCG GTTGTTTAGC CCCAGTGACC
TATGCACAAA CCTCACCCCC TTCGATACAG TTGGCAACCG AGTTTGATGC CCAGCAAGAG
ATCCATATTC AGGACTTTTT GATTAGCGAA AAACTCGACG GGGTGCGAGG TTACTGGAAT
GGTCAGGCAC TATTGACTCG GCAAGGTAAT CTTATTGCTG CTCCAACTTG GTTTATCGCA
AATTTTCCGA ATTATCCCCT CGATGGTGAA TTATGGCTTG GGCGAGGCCA GTTTGAGGTT
ATGTCGAGCA TAGTTCGACA AACCTCAGCC AAGGATGATG ACTGGCGCAA AGTGCGATTT
ATGGTGTTCG ATGTCCCTAA GGCGGGTGGC GACTTTCAGC ATCGCTATCA ATTTGCGTTG
ACCGAATTAA GCGATAAATC TCATTATCTT GAAGTCATAG CGCAGTTCCA AGTGGACAGT
CTTGAAGCTC TGTATCAAAA ACTTGATAGC TTAGTTGCTA AAGGCGCTGA AGGATTAATG
CTGCATCGCA GCTCAGCGAC GTATGTCAGT GGCCGCAATC CTAATTTGAT GAAATTAAAA
CCCTATTATG ATGCTGAAGC GACAGTGATC GGCCATATAC CAGGGAAAGG TCAATTTGCA
GGGCAAATGG GTGCAATAAG AGTGCAAACC CCAGACGGCC GGATTTTCAA CATAGGCACA
GGTTTTAATC TCGCAGAGCA CCAACATCCT CCCGCAGTGG GCGCAATCAT CACCTATAAA
TATCTGGGTC TTACCGTAAA TGGCTTACCC AGATTTGCCA GTTTCCTGCG GGTACGCGTC
GATTTAGATG AGAGTAATAA AGTCATTTCA TCGCAAGAAG GAAACTAG
|
|---|
| Protein sequence | MTHISPLQDL TFHRFIRFRF FKQRLLLLSL LIFGCLAPVT YAQTSPPSIQ LATEFDAQQE
IHIQDFLISE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA NFPNYPLDGE LWLGRGQFEV
MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG DFQHRYQFAL TELSDKSHYL EVIAQFQVDS
LEALYQKLDS LVAKGAEGLM LHRSSATYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA
GQMGAIRVQT PDGRIFNIGT GFNLAEHQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRV
DLDESNKVIS SQEGN
|
|---|
| |