Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1704 |
Symbol | |
ID | 4845513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1981800 |
End bp | 1983080 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640118919 |
Product | major facilitator transporter |
Protein accession | YP_001050082 |
Protein GI | 126173933 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.136946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCC AAATTAAAAA TCGTCATTCA ACGACAGAGT GCAGTAGTCC GTTAGCCCAA ACAAACACTC AAGGGATATC AACAGGCACA ACGATTATCT TTGCCATAGC CTGCGGACTC AGTGTCGCCA ACGTCTATTT TGCACACCCT CTACTTGATA CCATGGCAGC CGACTTCGGA ATTAGTGCCT CTGTAATAGG CTTAATAGTG ACATTGACTC AGATAGGTTA TGCCTGCGGG CTTTTATTCA TCGTGCCGCT GGGCGACATC CTCGACCGAC GTAAACTTAT CGTCGCTCAG GGCTTACTGT CCGCCATTGC ACTGACCGTG GTCGCGACGA CTCATAATGA AAGCGTACTC TTTGTCGCCA TGGTTGCAGT AGGATTATTA GCTGTGGTTG TGCAGGTTTT AGTAGCGTTT GCTGCGATGC TCGCCTCCTC AACGACACGA GGAAAAACGG TTGGAATGGT CACCAGCGGC ATAGTCATTG GCCTATTGCT GGCCCGCTTC ATATCTGGAG TACTTGCCGA TTTAGGTGGT TGGCGAACGG TTTATATGAC ATCCGCCGTG ACAACACTGT TCATGGCCAT ATTGCTCTAT CGCATCCTGC CGCGCGAGAC GACCACCCGA ACCTCGGCTT CCTATCCAGC TCTACTTCGC TCGGTGCTAA CATTGTTTGT GGAGGAGCCA GTTCTGCGAG TCCGTGCCAT TCTTGCTCTG CTAATATTCA CTATTTTCAG CATATTCTGG ACTGCGCTAG TGCTACCACT CAGCGCCCCT CCTTACTTGA TGTCACATAC CCAAATCGGA CTGTTTGGTC TTGCTGGACT CGCTGGAGTG TTTGCCGCTG CTTGGGCAGG ACATCTGGCT GATCGTGGTT TAGGGCAGTG GACAAGCGGC ATATCTCTGA TGTTACTACT CCTGTCGTGG GTGTTCATTG CCCAGCTTAA TTCCTCAATA GTGGCATTGG TGATCGGTGT GATCATATTA GATCTGGCTG TACAGGCCGT GCACGTCACA AATCAAAGCA TGATTTTCGC TATCCGGCCC GAGGCACATA GCCGACTGGT CGCAGGCTAT ATGCTGTTCT ATTCGATAGG CAGTGCTATT GGCGCTATCG CCTCAACAGC CGTATACGAT AGTGCAGGTT GGAATGGCGT ATGCATTTTA GGTACTGCAA TCAGCATCGT TGCCGTCATT TTCTGGGCAG CAACCGCACA TATTGGCCGC GCACAACTTC AGGCGACATT AACGGCAAGC CAACTGAAAA TTAGGATATA A
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Protein sequence | MNSQIKNRHS TTECSSPLAQ TNTQGISTGT TIIFAIACGL SVANVYFAHP LLDTMAADFG ISASVIGLIV TLTQIGYACG LLFIVPLGDI LDRRKLIVAQ GLLSAIALTV VATTHNESVL FVAMVAVGLL AVVVQVLVAF AAMLASSTTR GKTVGMVTSG IVIGLLLARF ISGVLADLGG WRTVYMTSAV TTLFMAILLY RILPRETTTR TSASYPALLR SVLTLFVEEP VLRVRAILAL LIFTIFSIFW TALVLPLSAP PYLMSHTQIG LFGLAGLAGV FAAAWAGHLA DRGLGQWTSG ISLMLLLLSW VFIAQLNSSI VALVIGVIIL DLAVQAVHVT NQSMIFAIRP EAHSRLVAGY MLFYSIGSAI GAIASTAVYD SAGWNGVCIL GTAISIVAVI FWAATAHIGR AQLQATLTAS QLKIRI
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