| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1608 |
|---|
| Symbol | |
|---|
| ID | 4842077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1879343 |
|---|
| End bp | 1881208 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640118827 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_001049991 |
|---|
| Protein GI | 126173842 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0286409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAA AGATCCGCGA TGGTTCGCAA GGCTTGATTG CTAAAGGCAT TCTCGTACTT
GTGATTTTAT CTTTTGCATT TGCAGGAGTC AGCAGTTACT TAGGTTCTAC AACTGATGTG
CCTGCAGCAG AAGTGAACGG TGACATAATC ACTAAAGCCG AGCTTGAGCA GGCTTACCAA
AGCGAGCGCT CTCGTATGGA GCAACAGCTA GGTGAGATGT TTGCTGCGTT ATCTGCTGAC
GAAAAATATC TACAAAGCAT TAAGCAGAGC GTATTAGAGC GCTTAGTGGC TGACAAACTG
ATTGATCAAG CTGCTAAGGC TATGGGGTTG CGTGTATCTG ACGAACAGAT CATTGCAGCC
GTGAAAACTG AACCTGCATT CCAAACCGAT GGCAAATTTG ATAACGATCG TTATCAAGCG
ATTCTACGTC AGTTAGGTTA TCAACCACAG GCGTTCAGAG ACATGATGCG CGTCGATATG
ACCCGTCGTC AGTTAACGGC TGCGCTTGTT GGTACTGAAT TTGTGTTAGC TGGCGAAGCT
AAGCAGTTAG CTGAGTTACA AGGCCAAACC CGCGATGTTC GTTATTTAGT CGTTGATTCT
GCGCCATTCT TAGCGACAGC GGTTGTGACT GACGAGCAAG TGAAAAACTA TTACGACGCA
AACCAAGGGC AGTTTATGAG CCCTGAAATG GTGAGCTTAG AATATGTTGA GCTGAATGCG
GCTGATTTTG CTAAAAATAA CCCAGTTTCA GACGAAGAAG CGCAAGCTTA TTACGAAGAA
CACAAAGCGC AATACGTGTC TAACGAGAAG CGTCTTGCCG CACACATTCT GGTTATGCCA
GGTAGTGATG AAGCGGCTGC AAAAGCCAAG GCTGAAGATT TAGCGAAGCA ATTAGACAGC
GGTGCCGATT TTGCTGATCT GGCTAAAGCG AACTCTGACG ATACCTTGAG TGCAGAGCAG
GGCGGTAAAC TGGATTGGTT TGAACCAGGT GTGATGGACC CCGCTTTCGA TGCTGCATTA
TTTGCATTGA ACAAAGGTCA ACATTCTGCG GTGGTTAAAA CTGACTTTGG TTTCCACATT
ATCAAGCTAT TAGATGTGCA ACCGGGTGTG ACTGTACCGT TTGCCGATGT GAAAGCTAAG
ATAGTAGCGC AATTGCAAGA TAAGAAAGCG GTTGATCAGT TCTACAGCTT ACAAAGCAAA
TTGGCTGATA CTAGCTATGA AGTGCCAGAT ACACTATCTG AAACTGCTAA AGCTGTGGGC
GTCGACATTA AGACGACTCC ACTGTTCTCT CGCGATAACG TTCCTGCAGC GCTGAACAAG
CCTGACTTAG TCAAAGCTGC GTTCTCTGAA ACTGTTATGC TAAAAGGGTT AAACAGTGAA
GTGATTGAGC TTGAACCTAA CCACGTGGTG GTGGTGCGTG TGAAGGAACA TCACGATGCG
GGCACTTTGG CCTTAGCGGA AGTGAAAGCC AATATCGCCG AACGTTTGAA GCAAGATCAA
GCAAACGAAG CTGCCCGTGC GAAAGCACAA GAGCTGATGG CACAAGTTAA AGCCGGTGCA
ACGGATCTTG GTTTAGTGGC TAAAGCGAAA CTAGGCCGCG GCGCGCAAGA TGTTGATGCT
GCGATTGTAG GCAAAGCGTT CCAAATGCCA ACACCAAGCA CTTCTCCAGT TGTCGATACC
GTGGGTTTAG CAAATGGTTA TGCCGTGGTT GCGCTAGATA AAGTCAACGC TGCTGAAGGT
GTGAGTGATG AGCTGGTTAA TGCGCTTAAA CAACGCCTGA ATGCTCAATA CAGCGAAGCA
GACTACCGTG GCTTGATAGA TTCACTTAAA GCCAATGCCA AGGTGCTTTA CCCTGTAGAA
GAATAA
|
|---|
| Protein sequence | MLEKIRDGSQ GLIAKGILVL VILSFAFAGV SSYLGSTTDV PAAEVNGDII TKAELEQAYQ
SERSRMEQQL GEMFAALSAD EKYLQSIKQS VLERLVADKL IDQAAKAMGL RVSDEQIIAA
VKTEPAFQTD GKFDNDRYQA ILRQLGYQPQ AFRDMMRVDM TRRQLTAALV GTEFVLAGEA
KQLAELQGQT RDVRYLVVDS APFLATAVVT DEQVKNYYDA NQGQFMSPEM VSLEYVELNA
ADFAKNNPVS DEEAQAYYEE HKAQYVSNEK RLAAHILVMP GSDEAAAKAK AEDLAKQLDS
GADFADLAKA NSDDTLSAEQ GGKLDWFEPG VMDPAFDAAL FALNKGQHSA VVKTDFGFHI
IKLLDVQPGV TVPFADVKAK IVAQLQDKKA VDQFYSLQSK LADTSYEVPD TLSETAKAVG
VDIKTTPLFS RDNVPAALNK PDLVKAAFSE TVMLKGLNSE VIELEPNHVV VVRVKEHHDA
GTLALAEVKA NIAERLKQDQ ANEAARAKAQ ELMAQVKAGA TDLGLVAKAK LGRGAQDVDA
AIVGKAFQMP TPSTSPVVDT VGLANGYAVV ALDKVNAAEG VSDELVNALK QRLNAQYSEA
DYRGLIDSLK ANAKVLYPVE E
|
|---|
| |