| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1603 |
|---|
| Symbol | tig |
|---|
| ID | 4844697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1872731 |
|---|
| End bp | 1874035 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640118822 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_001049986 |
|---|
| Protein GI | 126173837 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000736756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAGC AACCCAAGGC CTAGAGCGTC GCCTGACCAT TTCTGTTCCT
GCTGAACAAA TTGAAAAGCT GGTTAAAGAC AGTTTACAAC GTGAAGCTAA GCGTGCTCGT
ATCCCAGGTT TCCGTCCTGG TAAAGTGCCT ATTACTGTAA TTAACAAACG TTACGGCGCA
GCGATTCGTC AAGACATCAT GGGTGAAGTG ATGCAACGTA ACTTCATCGA AGCAATTATT
GCTGAGAAGT TAAACCCAGC CGGTGCACCG ACGTTTGTTC CAGGTTCAAC TGATGGCGAA
AAGTTCGAAT TTATCGCTAC CTTTGAAATC TATCCAGAAG TTGAGCTGAA AGGCTTAGAT
GCAATCGAAG TAGAACAACC AAAAGCTGAA GTGACTGACG CTGACGTTGA CACTATGATT
GAAACGCTAC GTAAACAACA CGCAACTTTC GCTGCTGTTG AACGTGAAGC TGCCGATGGC
GACAAAGTGA AAATGAACTT TGTTGGCTCA GTTGATGGTG AAGAATTTGA AGGCGGTAAA
GCTGACGATT TCGAACTGCA ATTAGGTAGC GGCCGTATGA TCCCTGGTTT TGAAGCGGGT
ATTTTAGGTC ACAAAGCGGG TGAAGAATTT GTTATCGACG TGAACTTCCC AGAAGAATAT
CACGCTGAAA ACCTGAAAGG TAAAGCCGCT AAGTTCGCGA TTACGCTTAC TGAAGTTCAA
GCAGCTAACC TGCCAGAAGT AAACGATGAG TTTGCTGCTC TGTTCGGTAT CAGCGAAGGT
GGCTTAGAAG CCCTTAAAGC TGAAATCCGT AAAAACATGA ACCGCGAACT TGAGCAAGCG
TTAAAAGCTA ACGTGAAAGA GCAAGTGATC AACGGTCTGT TAGCGAACAA TGACATCACT
CTGCCAAAAG CACTGATCGA TGGCGAAGTT AACGTACTGC GTCAACAAGC AATGCAACGT
TTTGGCAATC AAACGGCAAA CATGCCTGAA CTGCCAGCTG AATTGTTCAC TGAACAAGCT
GCACGTCGCG TTAAAATCGG TCTGTTATTA GGCGAAGTCA TCAAGACTAA CGAACTGAAA
GCAGAAGACG AACGCGTACA AGGTTTGATC GCTTCTATGG CTTCTGCCTA CGAAGATCCA
AGTGAAGTTG TTGCTTATTA CAACAGCAAC AAAGAGCTGA TGCAAAACAT GCGCAACGTT
GCTTTAGAAG AGCAAGCGGT TGAAGCACTG TTGAAATCTG CCAAAGTGAC CGAAAAAGAA
GTCGCTTTTG AAGAATTTAT GAACAAGGCT ACTGGTCGCG CATAA
|
|---|
| Protein sequence | MQVSVEATQG LERRLTISVP AEQIEKLVKD SLQREAKRAR IPGFRPGKVP ITVINKRYGA
AIRQDIMGEV MQRNFIEAII AEKLNPAGAP TFVPGSTDGE KFEFIATFEI YPEVELKGLD
AIEVEQPKAE VTDADVDTMI ETLRKQHATF AAVEREAADG DKVKMNFVGS VDGEEFEGGK
ADDFELQLGS GRMIPGFEAG ILGHKAGEEF VIDVNFPEEY HAENLKGKAA KFAITLTEVQ
AANLPEVNDE FAALFGISEG GLEALKAEIR KNMNRELEQA LKANVKEQVI NGLLANNDIT
LPKALIDGEV NVLRQQAMQR FGNQTANMPE LPAELFTEQA ARRVKIGLLL GEVIKTNELK
AEDERVQGLI ASMASAYEDP SEVVAYYNSN KELMQNMRNV ALEEQAVEAL LKSAKVTEKE
VAFEEFMNKA TGRA
|
|---|
| |