Gene Sbal_1460 details

Gene Information

• Locus tag: Sbal_1460
• Symbol: lpxD
• ID: 4842903
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 1693476
• End bp: 1694501
• Gene Length: 1026 bp
• Protein Length: 341 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640118680
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_001049847
• Protein GI: 126173698
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000103584
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGTG TGACTTTAAA AGAGCTAGGC CTGTTATTAG ACGGTGATAT CCAAGGCGAC 
GAAACGCTAA TTATTGATAG TGTGGCGACC TTAGAACATG CCAAAGCAGG TCAAATCTCT 
TTTTTAGCCA ACAGTAAATA TCGCTCTCAG CTTGAGGAAA CTCAAGCGAG TGCGGTGTTA 
TTGTCAGCTA AAGATGCGCA GGATTATCAA GGTACTGCGT TAATTGTAAA AGATCCTTAT 
GTCGGTTTTG CCCGTGTTGC CCAGTATTTG GACACTACGC CTAAAGCGGC GGTGGGTATC 
CATCCTTCGG CTCAAATTGA CGCTTCTGCT CATATAGGTG AAGGTGTTGC GATTGGGGCG 
AATGCGGTTA TTGGTGCGAA CGTCATTTTA GGTGAAAATG TCCAGATAGG TGCCGGTGTC 
GTGCTCGGAC AAGATGTGGT TATTGGCTCA AAAACGCGTT TGTGGGCTAA TGTCACTGTC 
TATCACGATG TGCATTTAGG ACAAGATTGT ATTATCCATT CGGGCGCTGT ATTAGGCTCC 
GATGGTTTTG GTTATGCGAA TGATCGCGGT CAGTGGATTA AAATCCCACA AACGGGCGGC 
GTTCGTATCG GCGATCGAGT TGAAATAGGC GCGAATTCAA CGGTAGATCG GGGGGCATTA 
GGCCATACCG AGATCCACGA TGGTGTAATT ATCGATAACC AAGTACAAAT TGCCCATAAC 
GATATTATCG GTGAGAATAC CGCTATCGCA GGCAGTACGA CTGTCGCAGG CAGTGTCACC 
ATAGGTAAAT ATTGTATTAT TGGTGGTAGT TGTGCCATCG CAGGTCATTT GAGCATTGCC 
GATGGTGTGC ATGTGTCTGG TGGGACTAAC ATTACCAGTA CTATGCGTGA GCCTGGTTTA 
TACTCTTCTG CCACTGTGGC AATGGACAAT AAACTTTGGC GTAAAAACAC AGTTCGTTTC 
CGTCAGTTAG ATGAACTGTT CCATCGTGTT AAAACGTTGG AAAAAAATTT AAAAACACCA 
GATTAA 

 

Protein sequence

MNSVTLKELG LLLDGDIQGD ETLIIDSVAT LEHAKAGQIS FLANSKYRSQ LEETQASAVL 
LSAKDAQDYQ GTALIVKDPY VGFARVAQYL DTTPKAAVGI HPSAQIDASA HIGEGVAIGA 
NAVIGANVIL GENVQIGAGV VLGQDVVIGS KTRLWANVTV YHDVHLGQDC IIHSGAVLGS 
DGFGYANDRG QWIKIPQTGG VRIGDRVEIG ANSTVDRGAL GHTEIHDGVI IDNQVQIAHN 
DIIGENTAIA GSTTVAGSVT IGKYCIIGGS CAIAGHLSIA DGVHVSGGTN ITSTMREPGL 
YSSATVAMDN KLWRKNTVRF RQLDELFHRV KTLEKNLKTP D