| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1367 |
|---|
| Symbol | |
|---|
| ID | 4845672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1566404 |
|---|
| End bp | 1567489 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640118587 |
|---|
| Product | putative RNA 2'-O-ribose methyltransferase |
|---|
| Protein accession | YP_001049754 |
|---|
| Protein GI | 126173605 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0458606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC TATTTTTATT TTGCCGCGCA GGCTTTGAAA AAGAATGCGC TGCAGAAATC
CAACAGCGAG CCGGTGAGCT CAATGTGGGT GGCTTTGTTA AGGCCAACAA TAACGACGCC
TATGTCGTAT ACCAATGTTT TGAAGATGAC GCCGCAGATA CGTTAGTGAA ACAACTGCCT
TTAGATTCGC TCATTTTCGC TCGCCAGATG TTTGCTGCCA GCGACTTGTT AGTCGACTTG
CCTGAAAACG ACAGAATTAG CCCAATCGTG GCGGCACTCA GTGACGTCAG CAAAGCGGGT
GAAGTGCGGG TTGAAACGCC AGATACTAAC GAAGCGAAAG AGCTCTCGGC TTTTTGCCGT
AAGTTCACTG TGCCTTTACG CCAGCATTTG AAAAAATCTG GCAGTTTGCT CGCGCAGGAA
AATCCAAAAC GTCCGATTAT CCACGTGTGT TTTATCGGAC CCGGCCGTGC CTATGTGGGT
TATTCCTACA GCAATAACAG CTCGCCACAC TTTATGGGTA TTCCACGTCT GAAAATGGCG
GCGGATGCTC CGAGTCGTTC TAGCCTGAAA CTCGATGAAG CCTTTGGCCA ATTCGTGCCT
AAGGAAGAGC AAGAAGAGCG TATTCGCAGT GGTATGAACT CAGTGGATTT GGGCGCTTGC
CCAGGTGGCT GGACTTATCA ACTGGTGCGT CGCGGCATGT TTGTGTCGGC TGTTGATAAT
GGTCCCATGG ATGAGAAACT CATGGAAACG GGCCAAGTGA AGCATTACCG TGAAGACGGT
TTCCGTTTCG AGCCACAGCG CAAAAATATC TATTGGCTAG TGTGCGACAT GGTTGAGAAA
CCAGCGCGTG TTGCCGAACT GATTGAAGCT TGGGCGATTA ACGGTTGGTT TAAGGAAGCG
ATTTTCAACC TTAAATTACC GATGAAGAGC CGCTATAAAG AAGTCACTGC CATTCTTGAG
ACCATGCAGA CCATTCTTAA AGAGAATGGC GTGACCGATT TTAAAGTGCA GTGTAAGCAT
CTTTATCACG ATCGTGATGA AGTGACAGTG CATTTATGGC TGCGTCCTAA TACCGCGTGG
AATTAA
|
|---|
| Protein sequence | MKNLFLFCRA GFEKECAAEI QQRAGELNVG GFVKANNNDA YVVYQCFEDD AADTLVKQLP
LDSLIFARQM FAASDLLVDL PENDRISPIV AALSDVSKAG EVRVETPDTN EAKELSAFCR
KFTVPLRQHL KKSGSLLAQE NPKRPIIHVC FIGPGRAYVG YSYSNNSSPH FMGIPRLKMA
ADAPSRSSLK LDEAFGQFVP KEEQEERIRS GMNSVDLGAC PGGWTYQLVR RGMFVSAVDN
GPMDEKLMET GQVKHYREDG FRFEPQRKNI YWLVCDMVEK PARVAELIEA WAINGWFKEA
IFNLKLPMKS RYKEVTAILE TMQTILKENG VTDFKVQCKH LYHDRDEVTV HLWLRPNTAW
N
|
|---|
| |