| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1244 |
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| Symbol | |
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| ID | 4843228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 1429633 |
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| End bp | 1431303 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640118463 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_001049631 |
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| Protein GI | 126173482 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0442261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAC GTCAATTTCT AGCAGGCTCT GCCGCCCTAA TGACGACTGC TGTTTGGGCG
AGTTCAGTGG ATAAATTACT GGCACAGGAT AACGCACAAG CGGTCGCCCG TGAGCCATGG
GCCATAGGTT TTAGCGGGGC GGAAGGCGAC TATCAGCCAC TCACTATGCA GGTTTCGGGC
GAATGGCCAG CGCAATTGAG CGGTAATTTA TATCGTAATG GGCCAGCGAA AATGTCTCGG
GCAGGTAAGG CATATCAGCA TTGGTTCGAT GGCGATGGCA TGGTGCAGCA GTTTAGTGTG
GCTAATGGGC AAATTCAGCA TCAGGCTAAG TTTATCCAAA CAAAGAAGTT TAAAGTGGAG
GAGGCCGCTG GCGCGTTTAA GTACACCACC GCAGGCACAG TGATCCCCAA TGCTTTACCT
ATTCGAAATA ACGATGACTT GAATGTGGCT AACACCAGTT TATTACCGCG CCACGGTGAG
TTGCTTGCCT TGTGGGAAGC GGGTTCACCC TATCGACTCG ATGCGCAGAC CTTAACCACG
CTCGGCGTTA AAAGCTTTGG CGACAAGTTT AAGGGCTTAC CCTTTTCCGC CCATCCACTC
GATGATGGAC AAGGTGGACT GTGGAATTTT GGCGTCTGGT ATGTCGGCGG CGAGAAGCAA
TTACTTGTGT ATCAAGTGGC AGCCGATGAC AGCATTGCCA GAATGGAAGT GATTGAATTA
CCGCAGGCGA GTTACTTACA TGCCTTCGCG CAGAGTGAGA ATAAGCTAGT GTTTTATATT
TCATCCTGCG TGTATGAAGA GGGCGAAACC TATATCGATG CTTTTAAATG GCGACCCGAA
TTGCCATCGC AATTACTGGT TATCGACAAA GCCGACTTTA AAGCGCGCCA GTTACACCCG
CTGCCTGCTG GATTTGTGTT TCACTTTGGT CAAGCCATTG AGAAGAATGA CGAACTGTCA
GTGCAACTTT GCCTCTATCC CAATTCGGCG ATTTTAACTC AAGGGATGAA GGGGCTACTG
ACGGGCGCCC GAAAAACAAA AACACCCCAT GCCGAGTTAG TGACGATCAC AGTACCTCTC
ACAGCACCAC TTACAGCAGC TAGCAAAACG CAGTTTGCGG AGACCTTGTC CTCCTCTGCA
CGTATTAACC GCAGCGGCGT GATGATGGAG TTTCCCCAGT TTGCGCAGCA CACTATGAGT
AACAAAGAGT CTGCACAGCA AACGAGCAAT GCTGAAAATC TTACAGAGAA AATGGGTGGG
GCATCAGAGT TTGTCCCGTT ATTTGGCGTC GGAGCAAGAT CAGACTCTGT TGCTAATTCT
GGTGCTAATT CTAACTTTAA ATATGAAGCC GAATCTGAAT CAGGACTGAG TAATACTCTG
TATTGTATTC ATAATACAAA AGACAGCAGC CAGCACGGTA CGGATGAACT TGGCGACGCG
AGCTATAGCG CGTTTTATCT TGGCAAAGGC AAGATTGCCG AAGAGCCGCT CTATATCCCC
GCCACTGAGC AGCATGAAGC CTATTTGTTG ATGACTTGGC TCGATTACCA CAATGCACAA
TCTGGCTTGT CTTTGTTTCG TGCCAGTGAC ATCAGTGCGG GACCCATTGC TTCGGCTCAG
ATGAACAGGG TATTGCCGTT AGGATTTCAC GGTTGTTTCA TTAACGCTTA A
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| Protein sequence | MDRRQFLAGS AALMTTAVWA SSVDKLLAQD NAQAVAREPW AIGFSGAEGD YQPLTMQVSG
EWPAQLSGNL YRNGPAKMSR AGKAYQHWFD GDGMVQQFSV ANGQIQHQAK FIQTKKFKVE
EAAGAFKYTT AGTVIPNALP IRNNDDLNVA NTSLLPRHGE LLALWEAGSP YRLDAQTLTT
LGVKSFGDKF KGLPFSAHPL DDGQGGLWNF GVWYVGGEKQ LLVYQVAADD SIARMEVIEL
PQASYLHAFA QSENKLVFYI SSCVYEEGET YIDAFKWRPE LPSQLLVIDK ADFKARQLHP
LPAGFVFHFG QAIEKNDELS VQLCLYPNSA ILTQGMKGLL TGARKTKTPH AELVTITVPL
TAPLTAASKT QFAETLSSSA RINRSGVMME FPQFAQHTMS NKESAQQTSN AENLTEKMGG
ASEFVPLFGV GARSDSVANS GANSNFKYEA ESESGLSNTL YCIHNTKDSS QHGTDELGDA
SYSAFYLGKG KIAEEPLYIP ATEQHEAYLL MTWLDYHNAQ SGLSLFRASD ISAGPIASAQ
MNRVLPLGFH GCFINA
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