| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1109 |
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| Symbol | |
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| ID | 4843224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 1275896 |
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| End bp | 1277032 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640118330 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001049499 |
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| Protein GI | 126173350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000609618 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATCA CCTCGGGCGT CACCAATAAA CCGACAACAA AGACGCAAGA AAAAGTACTG
CTCAGAATTG AGCGGGTAAG CAAGTTATTC GATGACGTGC GGGCTGTCGA CGACGTGTCA
TTAACTATCA ATAAAGGCGA AATCTTTGCT TTACTCGGCG GCTCTGGCTC GGGTAAGTCG
ACGTTATTGC GCATGTTAGC GGGATTTGAA AAGCCCACCT CTGGCCGTAT TTTCCTCGAT
GGCGAAGACA TCACAGATTT ACCGCCGTAC GAACGTCCGA TCAATATGAT GTTCCAATCC
TATGCTCTGT TTCCCCACAT GACAGTGGCG CAAAACATTG CCTTTGGTTT GAAGCAAGAT
AAGTTACCTA AGGCCGAAAT TGAGCAGCGC GTACAAGATA TGCTCAAGCT AGTACACATG
GAGCAATACG GTAAACGTAA GCCGCATCAG TTATCCGGTG GTCAACGTCA GCGTGTTGCC
TTGGCTCGTT CACTGGCAAA ACGGCCGAAA TTATTACTGC TCGATGAGCC TATGGGCGCA
TTGGACAAAA AACTGCGTAC CCAGATGCAA CTCGAAGTGG TTGAAATTCT TGAGCGTGTC
GGTGTGACCT GCGTGATGGT GACCCACGAT CAGGAAGAAG CCATGACAAT GGCGGGACGC
ATTTCCATTA TGAGCGACGG TTGGATTGCC CAAACAGGCT CGCCCATGGA CATTTACGAA
AGCCCGAACA GCCGCATGAT TGCCGAGTTT ATCGGCACTG TGAACTTGTT TGGTGGCGCG
ATTGAAGTGG ATGAAGTCGA CCATTTGATC ATTAAACCTA ATGAGTTGGC TCAATCTTTC
TATGTTGGTT ACGGGGTGTC GACCAACGTA GAAGACAAAA ATGTGTGGTT AGCTGTGCGT
CCCGAAAAGA CCATTATTAG CCGCGAACAG CCTGAAGGTC AGTACAACTG GGCGAAAGGA
ATCGTACACG ATATCGCGTA TTTAGGCGGT ATTTCAGTGT ATTACATTCG TTTAGAGAAT
GGTCAAATCG TACAGTGCAG TATGACTAAC CGTGAACGCC GCGCCGATCA TGCCACATGG
GATGACGAAG TGTTCATCAG TTGGGAGGAC ACCAGTGGCG TGGTGTTGAG ATCATGA
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| Protein sequence | MAITSGVTNK PTTKTQEKVL LRIERVSKLF DDVRAVDDVS LTINKGEIFA LLGGSGSGKS
TLLRMLAGFE KPTSGRIFLD GEDITDLPPY ERPINMMFQS YALFPHMTVA QNIAFGLKQD
KLPKAEIEQR VQDMLKLVHM EQYGKRKPHQ LSGGQRQRVA LARSLAKRPK LLLLDEPMGA
LDKKLRTQMQ LEVVEILERV GVTCVMVTHD QEEAMTMAGR ISIMSDGWIA QTGSPMDIYE
SPNSRMIAEF IGTVNLFGGA IEVDEVDHLI IKPNELAQSF YVGYGVSTNV EDKNVWLAVR
PEKTIISREQ PEGQYNWAKG IVHDIAYLGG ISVYYIRLEN GQIVQCSMTN RERRADHATW
DDEVFISWED TSGVVLRS
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