Gene Sbal_1057 details

Gene Information

• Locus tag: Sbal_1057
• Symbol: ispH
• ID: 4841391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 1218350
• End bp: 1219306
• Gene Length: 957 bp
• Protein Length: 318 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640118281
• Product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
• Protein accession: YP_001049450
• Protein GI: 126173301
• COG category: [I] Lipid transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0761] Penicillin tolerance protein
• TIGRFAM ID: [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCG ATCCTACCAG CCCAAGTTTG AATATTATGC TCGCGAACCC GCGTGGTTTT 
TGTGCGGGTG TTGATCGTGC TATCAGTATT GTTGAACGGG CGTTGGAATT GTTTTCACCG 
CCTATCTATG TTCGCCATGA AGTCGTACAT AATCGCTATG TCGTGCAGAA TCTGAAGGAT 
CGCGGTGCGG TTTTTGTCGA AGAGTTAGAT CAAGTGCCGG ATAACAACAT TGTTATCTTC 
AGTGCCCATG GTGTTTCTCA AGCGGTGAGA CAAGAAGCTA AGGCGCGAGG GTTGAGAGTT 
TTTGATGCGA CTTGTCCCTT AGTGACCAAA GTGCACCTTC AAGTGACGCG TGCAAGCCGT 
AAAGGTATTG AATGTATCTT GATTGGCCAT GAAGGGCACC CTGAAGTCGA AGGCACTATG 
GGTCAATACG ATAATCCTAA CGGCGGCGTT TATCTGATTG AATCGCCTGC TGATGTGGAT 
GCGCTAGAAG TGCGAGACCC TAACAATCTC TGCTTCGTGA CCCAAACAAC TTTATCTGTC 
GATGATACGT TAGACATTAT TGCCGCGTTG CAAAAAAGGT TTCCTTCAAT TGAAGGACCT 
CGTAAAGACG ATATCTGTTA TGCAACACAG AATCGTCAAG ATGCGGTACG TAATCTGTCT 
GCAGATGTGG ATTTGTTGAT TGTTGTTGGT TCAAAAAACA GCTCTAACTC TAATCGGTTA 
CGCGAGCTCG CATTGAAGAC CGGAACCCAG TCTTATCTGG TGGATACTGC TGACGATGTT 
GAATCAAGCT GGTTCGATAA TGTTTCGCGT GTTGCTGTTA CCGCAGGCGC TTCTGCACCT 
GAGGTCTTAG TTCAACAAGT TGTCCAAGCG ATTGCAAAAC TCGCCCCTAG CGTGGTAACT 
GAAGTCGAAG GCCGTAAGGA AGACACTGTC TTTGCGGTAC CTGCCGAACT GCGCTAA 

 

Protein sequence

MKLDPTSPSL NIMLANPRGF CAGVDRAISI VERALELFSP PIYVRHEVVH NRYVVQNLKD 
RGAVFVEELD QVPDNNIVIF SAHGVSQAVR QEAKARGLRV FDATCPLVTK VHLQVTRASR 
KGIECILIGH EGHPEVEGTM GQYDNPNGGV YLIESPADVD ALEVRDPNNL CFVTQTTLSV 
DDTLDIIAAL QKRFPSIEGP RKDDICYATQ NRQDAVRNLS ADVDLLIVVG SKNSSNSNRL 
RELALKTGTQ SYLVDTADDV ESSWFDNVSR VAVTAGASAP EVLVQQVVQA IAKLAPSVVT 
EVEGRKEDTV FAVPAELR