Gene Sbal_1006 details

Gene Information

• Locus tag: Sbal_1006
• ID: 4843664
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 1151640
• End bp: 1152203
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640118224
• Product: GPR1/FUN34/yaaH family protein
• Protein accession: YP_001049399
• Protein GI: 126173250
• COG category: [S] Function unknown
• COG ID: [COG1584] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0753776
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCTACAA AACTGGCTAA TCCAGCGCCA TTAGGTTTAA TGGGCTTTGG TATGACAACG 
ATTTTGTTAA ACATCCATAA CGCGGGATAT TTCCCTATTG ATTCTATGAT CTTAGCCATG 
GGGATTTTTT ATGGCGGCAT TGGTCAAGTG ATTGTGGGTA TTATGTGTTT TATGCGCGGC 
GATACTTTCG GTACGACGGC ATTTACCTCT TACGGGTTGT TTTGGTTAAC ATTAGTGGGA 
TTAATCCTAA TGCCTAATGC GGGCATTGCG GCGAGTCCAA CGTATTTTAT GGGCTGGTAT 
TTAACACTTT GGGGCATATT CACCGCATTT ATGTTTGTGG GTTCTTTGCG TTATCCACGA 
GCTAAGCAGT TTGTATTTGC TTCTTTGACG CTCTTATTTT TCCTGCTGGC TGCGCGTGAT 
TTTACGGGTA GCGCCTTGAT TGGCACGATT GCTGGCTTTG AAGGGATCAT CTGCGGTGCG 
AGTGCGATTT ATTTTGCGAT GGCACAGGTG CTCAATAATG AGTATGGCCG CACGATTTTA 
CCGGTTGGTG AATTGAAAAA GTAA 

 

Protein sequence

MSTKLANPAP LGLMGFGMTT ILLNIHNAGY FPIDSMILAM GIFYGGIGQV IVGIMCFMRG 
DTFGTTAFTS YGLFWLTLVG LILMPNAGIA ASPTYFMGWY LTLWGIFTAF MFVGSLRYPR 
AKQFVFASLT LLFFLLAARD FTGSALIGTI AGFEGIICGA SAIYFAMAQV LNNEYGRTIL 
PVGELKK