| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0988 |
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| Symbol | |
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| ID | 4843164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 1133625 |
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| End bp | 1135349 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640118206 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001049381 |
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| Protein GI | 126173232 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTTC AGCCTTCTTG CTTTACCTCT TTCACACAAG CCATTGATGC CTATGCCCTG
CCGCAGCGTT TTACATTTCC TTTCTATTAC GAACCACATC CGCTGTGCGT GATTGCAGCC
AACGAATTAC AACAACACCT TGAGACTCAA AGTGATTGGC AACATAACTT TGGCCTAACG
GGTGAGTTAA CTGGCGCCAT TGGCAAGATG TTCGGGGTAC TACTGGTGCA AAATACACAG
GGTGAAGTGG GCTATTTGTC GGCATTTTCG GGCAAGTTAG CCGAGCAAAA CCATTGGCCA
CGCTTTGTTC CACCTGTGTT TGATATGCTG GCTAAGGACA ATTTTTTCCA CGCCGAAAAC
CTGCAAATCA ATCAAATTAA CGAACAGCTA CTTACAGTAG AAAACCATCC CGACATTCCG
AGGCTATCAA CCGAGCTAGA AACTGAACAA GCTCAAGCGC AAGCCGAACT TGCCGCCCAC
AGACAAGTGA TGATCGATGG CCGCCAATCG CGCAAGGCGC AGCGTAATCA ACTCGCAGCC
CAATTGGCTG CCAATCCGAC TGATGAGACC TTGCGTGAAA ACGCAATAAC TGAAGCAAAG
CTCAGTCAAG AAAGCATCAA TGAAAAGAAT CAGTTAAGAG ATATTAAACG CTATTGGGAT
GAACGTATTC ATGTCATCAG CCAAGCGCTA AGCCCACTGA CAGATGGGCG TGACGCGTTA
CGACAACAGC GCAAACGGCT CTCGGCGGCG CTGCAGCAAA AGCTGTTTGA GCAGTATCGT
TTTTTGAATA TTAAAGGCAC AGAAAAGAGC CTTAACGGCA TATTTAACGG TACGGTTGAG
TTAACGCCAC CCGCAGGCTC GGGCGAATGT GCCGCGCCTA AGTTGTTACA TTACGCCTTT
AAACATGGTC TTAAGCCATT AGCTATTGCC GAGTTTTGGT GGGGCGCGCC GCCAAAATCA
GAAATCCGCC AGCATAAGCA GTTTTATCCT GCCTGTCTGC GAAAATGCCA ACCCATCTTG
GGGCATATGC TCGAAGGGCT CGTGGTCGAT GACAACCCTC TGCTTACCAA CCCCGCCGAA
GGCAAAACGC TATCTATCCT CTACCAGGAC GATGCGATGG CGATTGTAAA TAAACCCGCC
GAGTTTTTAT CCGTGCCCGG CAAAGAAATT GAAGACTCAG TGTATTCGCG CATGCGCCAA
ACCTTCCCCC ATGCCACAGG TCCGCTAATC GTCCACAGGC TCGATATGTC AACCTCGGGA
TTAATGGTGA TCGCGCTGAC AAAAGATGCC CATAAACAGC TGCAAAAACA GTTTATCCAG
CGCACTGTGA CTAAACGTTA TGTGGCACTT TTGGCGGGAA TGCCTGCGGT CATGGCAAAT
ACGCAGGCGA CGGGTAACAT CTCTTTACCC TTGCGTGGCG ATTTAGACGA TAGACCGAGA
CAACTCGTTT GCCACGAGTT TGGTAAAACT GCCGAAACCC ATTGGGAATT GAGCCAACTT
GATGAAATGG CACGTACAGC CCGCGTGTAT CTGTATCCTA AAACAGGCAG AACCCATCAA
CTCAGGGTTC ACTGCGCCCA CTCAGAGGGG CTAAATACCC CGATTGTCGG TGACGACCTC
TACGGCACTC GTGCCAATCG ACTGCATCTG CATGCGGATT TATTGATGCT TCAGCATCCC
GTTACCCGTG AACGGATGCG CTTTCAGGTC GATCCAGATT TTTGA
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| Protein sequence | MQLQPSCFTS FTQAIDAYAL PQRFTFPFYY EPHPLCVIAA NELQQHLETQ SDWQHNFGLT
GELTGAIGKM FGVLLVQNTQ GEVGYLSAFS GKLAEQNHWP RFVPPVFDML AKDNFFHAEN
LQINQINEQL LTVENHPDIP RLSTELETEQ AQAQAELAAH RQVMIDGRQS RKAQRNQLAA
QLAANPTDET LRENAITEAK LSQESINEKN QLRDIKRYWD ERIHVISQAL SPLTDGRDAL
RQQRKRLSAA LQQKLFEQYR FLNIKGTEKS LNGIFNGTVE LTPPAGSGEC AAPKLLHYAF
KHGLKPLAIA EFWWGAPPKS EIRQHKQFYP ACLRKCQPIL GHMLEGLVVD DNPLLTNPAE
GKTLSILYQD DAMAIVNKPA EFLSVPGKEI EDSVYSRMRQ TFPHATGPLI VHRLDMSTSG
LMVIALTKDA HKQLQKQFIQ RTVTKRYVAL LAGMPAVMAN TQATGNISLP LRGDLDDRPR
QLVCHEFGKT AETHWELSQL DEMARTARVY LYPKTGRTHQ LRVHCAHSEG LNTPIVGDDL
YGTRANRLHL HADLLMLQHP VTRERMRFQV DPDF
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