| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0930 |
|---|
| Symbol | |
|---|
| ID | 4843047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1068589 |
|---|
| End bp | 1069635 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640118149 |
|---|
| Product | ApbE family lipoprotein |
|---|
| Protein accession | YP_001049324 |
|---|
| Protein GI | 126173175 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.67844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAGA CCTTAAAGAT CAATACCTCA GCACTAAAGC ATTCATTTAA CTGGCTAGTC
CTCGTAGGGC TGGCCTTTTT TGTTTCAGCC TGTTCTAAGC AGAACGAAGT CATTTCGTTA
GCGGGCAGCA CTATGGGAAC GACTTACCAT ATTAAAGTCG TACCGAATGA GCAGATGCCG
ACAGCGCAGT TACTTCAAGC GGAAATTGAT TTAGCCCTTG AGCTGGTCAA TGACCAGATG
TCGACGTATC GCCCTGATTC AGAGTTATCC CGTTTCAACC AGTTGCCATT GGAGCAAAGC
GTTGAAGTCT CACCGGATAC CATCAAAGTG GTGCAAGAGG GAGTACGTTT ATATCAAGTG
ACGGATAAGG CACTTGATAT TACCTTAGGT CCTTTAGTTA ACCTGTGGGG ATTTGGGCCA
GATAAGCGTC CAACAAAGGT CCCGAGTCAG GCCGATATTG ATGCGGCAAA AGCCAAAACC
GGTATTAGTG AACTTTCCAT TGAAGGTAAC CGTCTAACTA AGCACAACGC CCATTTATAC
GTAGACCTAT CGTCGATTGC CAAAGGGTTT GGGGTTGATA AAGTGGCTTC CATTCTTGAT
AAATACCACG CGACTGGGTA TTTAGTTGAA ATTGGTGGCG AGCTCAGCAT TAAAGGTGCT
AAAGGCGATG GCAGCTCTTG GCGCGTTGCC ATAGAGCAAC CAACAGATGA CGGTTCTGAA
GCCGTACAGC AGGTTATCTC ACCAGGTACT ATGGCGATGG CGACCTCGGG CGATTATCGT
AATTATTATG AGGAAGACGG CCAACGTTTT ACCCATATAA TTGATCCGCG TACCGGTTTG
CCGATAAATC ATAAGCTAGC ATCCGTGACC GTATTGCATC AAAATTGTAT GACGGCCGAT
GGTTTTGCGA CGGCTATGAT GGTTTTGGGC ACAGAAGCAT CATTGGAGCT TGCCAAGAAG
GAACACTTGG CGATAATGCT TATCGAAAAG CAAGGCGACG GATTTAAGGT CTACTATAGC
GACGCCTTCA AGCCTTTCCT TATTTAG
|
|---|
| Protein sequence | MFQTLKINTS ALKHSFNWLV LVGLAFFVSA CSKQNEVISL AGSTMGTTYH IKVVPNEQMP
TAQLLQAEID LALELVNDQM STYRPDSELS RFNQLPLEQS VEVSPDTIKV VQEGVRLYQV
TDKALDITLG PLVNLWGFGP DKRPTKVPSQ ADIDAAKAKT GISELSIEGN RLTKHNAHLY
VDLSSIAKGF GVDKVASILD KYHATGYLVE IGGELSIKGA KGDGSSWRVA IEQPTDDGSE
AVQQVISPGT MAMATSGDYR NYYEEDGQRF THIIDPRTGL PINHKLASVT VLHQNCMTAD
GFATAMMVLG TEASLELAKK EHLAIMLIEK QGDGFKVYYS DAFKPFLI
|
|---|
| |