| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0606 |
|---|
| Symbol | |
|---|
| ID | 4842398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 692080 |
|---|
| End bp | 692982 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640117829 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001049004 |
|---|
| Protein GI | 126172855 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA TTGCCGCAAT ACGTAGTTTC GTCGAAGTGG CAAACTGTGG CAGCTTTACC
AAAGCTGCCG AACATTTAGA CCTCAGCCGC CTGCAGGTGT CCCGCCATAT TCAAGAAGTG
GAGCAGTGGT TGAGTTTGCG CTTACTACAC CGTACCACCC GCAGCGTCAG CCTGACCTTG
CAAGGCGAAG AAGCGCTGCA ATTTTGCCAG CGGATCTTAA GTGAAGTCGC CGCCATGGAA
AGCCGCGCCC ACAGCCATAA CAGTGAACTG GTGGGCAGTA TTCGTATCGC CACACCGATT
GGCCTTGGAC AGCACAGCCT GTTTGATGTT GTCGACCGCT TTATTAAAAT TCACCCTAAG
GTCAGCATTC AGCTGGTAAT GTCGGACAGT TTTGCCCAAT TGGTGGATGA GCGAGTCGAT
GTGGCACTGC GCTATACCGA GCAGCCCGAT GAGAATTTGA TTGCCCGCCG CTTAATGACC
ATAGATGCCG TGATCTGCGC TGCGCCGAGC TACCTTGATA GCAACACACC ACTTGTCGAG
CCCATAGATC TACTGGCTCA CAACTGCCTG ATACACTCGG CGCAACAAAA TTGGCCTTTC
CTGAAAGAGC TGCAAGCCGA GCATGTAAAA GTCACAGGCA ATCTTAAAGC TAACGACATG
GGCGTATTGG TGAGTGCGGC GCTGCGGGGA CATGGCATAG TGCGTTTGCC CTGCGACTTA
GCCAATCAAT ACCTTGCCAG CGGCCAGCTC AAAGAAGTGT TACCCGACTT TACGACGCCA
GGTCAAACCC TGTGGGCAGT ATACTTGTCC CGCAGTTATC AGCAAAATCT GGTGCGCGCC
TTTATCGATT TCACTGCCCA GCAATGGCAA CTCGATATCA AAAAATGGCT CCCAGCGCAT
TAG
|
|---|
| Protein sequence | MDKIAAIRSF VEVANCGSFT KAAEHLDLSR LQVSRHIQEV EQWLSLRLLH RTTRSVSLTL
QGEEALQFCQ RILSEVAAME SRAHSHNSEL VGSIRIATPI GLGQHSLFDV VDRFIKIHPK
VSIQLVMSDS FAQLVDERVD VALRYTEQPD ENLIARRLMT IDAVICAAPS YLDSNTPLVE
PIDLLAHNCL IHSAQQNWPF LKELQAEHVK VTGNLKANDM GVLVSAALRG HGIVRLPCDL
ANQYLASGQL KEVLPDFTTP GQTLWAVYLS RSYQQNLVRA FIDFTAQQWQ LDIKKWLPAH
|
|---|
| |