| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0576 |
|---|
| Symbol | |
|---|
| ID | 4842386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 651919 |
|---|
| End bp | 652593 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640117799 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001048974 |
|---|
| Protein GI | 126172825 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00494054 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGT TACTCGTTGA AGATAACCCA ATGCTAGTCA CCGAGCTGGA GAAACAACTC
AAACTCGCTG GCTATGTGAC CGATATTACA GACAAAGCGC TTGAAGCCGA TTATCTGATC
AAAGAAACCC AATACGATTG CGTGATCTTA GATATCGGCT TACCCGACGG CAACGGCCTC
GAACTGCTCG AAGGCTGGCG TAATCAAGGG ATCAGCACTC CAGTCATCAT GCTGACAGCA
CGCAGCCAGT GGCATGAAAA AGTCGAAGGC TTTAATGCTG GCGCCGACGA TTACTTAGGT
AAACCTTTCC ACGCACAGGA ATTATTGGCC CGTATTCAAG CCCTTATCCA CCGTGCCCAT
GGTCGTTTAA ACACTTCTAG CAAGCAATTG AGCTATGGCG GCGTGATATT AGACGAAGCC
GAGCAAACGG TGAAAGTGGC AGACCAATTG TTTGAACTGA CGGCGATGGA ATTCAGATTG
TTGAAGATTT TCCTGATGTC GCCTAAGAAG CTGTTATCTA AGACACAGCT CACCGATAAG
CTGTATCAGT TTGACGATGA AAAAGAGAGT AATGTGGTCG AAGTTTATGT GACCCACTTA
CGTAAAAAAT TAGGCAAAAC CGCTATCGAA ACCCGTCGCG GCCAAGGTTA TATCTTCCAC
GGCATTATTG AATGA
|
|---|
| Protein sequence | MKLLLVEDNP MLVTELEKQL KLAGYVTDIT DKALEADYLI KETQYDCVIL DIGLPDGNGL
ELLEGWRNQG ISTPVIMLTA RSQWHEKVEG FNAGADDYLG KPFHAQELLA RIQALIHRAH
GRLNTSSKQL SYGGVILDEA EQTVKVADQL FELTAMEFRL LKIFLMSPKK LLSKTQLTDK
LYQFDDEKES NVVEVYVTHL RKKLGKTAIE TRRGQGYIFH GIIE
|
|---|
| |