Gene Sbal_0349 details

Gene Information

• Locus tag: Sbal_0349
• ID: 4845425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 387540
• End bp: 388244
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640117565
• Product: TPR repeat-containing protein
• Protein accession: YP_001048751
• Protein GI: 126172602

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACAT TATTAATCGT CTCAAGCTTA GCGCTTATCA GCAGCCACGC GTTTGCAGCG 
TCGCCCTCTA ATGCCAATAT CACCAGCATA GATGCGGCCT CAAACTCGAT GAACCTAGCG 
CAGTTGCAAC AACTGAGTGC CAGCACCCAA GATTACGATA AAGCCTATGC GAACTATCGC 
TTAGCCATCA GCGCCAATGT CATGGGACAA AAAGTCCTCG CCAGCAGTGC ACTGACTAAT 
GCGCAAACAG CATTAGAAGC CTTAGACACC AGCCAAGCTG ACGCGGAATC CCTCGCGCTG 
TTATCGTCGG TTTATGGCAT GCAAATCGCC TTAGACAATA GCAAAGGCGC AACTCTCGGC 
ATGAAATCAG CCAAAGCCAT TGCCAACGCC GAGCAGTTAG AACCCCAAAA TCCACGGGTC 
GCGTTGGTTA AAGCGATCGC CGCCTATAAC ACGCCTGCTA TGTTTGGCGG CAGCATGCAA 
AATGCTAAGA CGCTCGCCAC CACGGCCATA GAAAGATTCG CCCAACCTTG CGACGACATT 
TGTTGGGGTG AAGCCGAAGC TTACACGTGG CGCGGGCTCG CTAAACAGGA ATTAGGCGAT 
AGCCAAGGCG CGAGTGAAGA TTGGCAACAG GCGATCAAAG TGCAAGCAGA TTACGGTTGG 
GCAAAATTTT TGCTTCAACA AAATCAGCAA TTAAGTGCAA ACTAG 

 

Protein sequence

MKTLLIVSSL ALISSHAFAA SPSNANITSI DAASNSMNLA QLQQLSASTQ DYDKAYANYR 
LAISANVMGQ KVLASSALTN AQTALEALDT SQADAESLAL LSSVYGMQIA LDNSKGATLG 
MKSAKAIANA EQLEPQNPRV ALVKAIAAYN TPAMFGGSMQ NAKTLATTAI ERFAQPCDDI 
CWGEAEAYTW RGLAKQELGD SQGASEDWQQ AIKVQADYGW AKFLLQQNQQ LSAN