Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0298 |
Symbol | |
ID | 4843854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 332798 |
End bp | 334975 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640117514 |
Product | TonB-dependent receptor |
Protein accession | YP_001048700 |
Protein GI | 126172551 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000594671 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATTCA AAACCTCGTT TGTTGCTTTA GCCGTATTTG CAGCGCTAAG CCAATCCGCA GCGGCTCAAG ATGCCCCCGA CAGCAGTTCA AACAACAAAA ATAAAGACAT AGAAAAAATC ACTGTCACCG CGAGTCGGAT GGATAAATCC CCCAGCTCAA TCCCCAATAC CGTCACTATC ATCGACCGCG CCCAGTTAGA AGAACAGTTC CGCACCACTA AAGATTTGTC GACCATTATC GGTAACTTAG CCCCGAGCTT TTCGCCAAGC CGCCAGAAGA TGAGTAACAC AGGCGAAACC CTGCGTGGTC GTCCGCCGCT GATCATGATC GACGGCGTAC CGCAATCAAA CCCACTTCGC AGTGGGGGTC GCTCGGGTCA AACCATAGAT CCAGCCATGA TTGAGCGTAT CGAAATCATT CACGGTGCCA ATGCAATGCA CGGTCTTGGT GCCCAAGGCG GCATCATCAA TTACATCACT AAAAAACCGA CGGGTGACAG CGAACAGGTT GCCAGTTTCG ATGTGACAGT TCCTGATTCG ATGAAATCTA ACGGTTTAAG CTTTGGTGCC AGCTATGCGT TTTCTGGCGA GTCAGAATTT ATCGACATGA TAGGTTCGGT TAGCTACCGC AATAATGGCG TCTATTATGA TGCCAACCAT AATGTCGTTG GTGTGGACAC GACTCAAGGC GAGTCGATGG ACAGCCAAAG CACCGACTTC TTCATCAAAC TTGGCCACAA CTTCGACGAG TCGCGCCTTG AACTAATGGT TAACCATTAC ACCGCAGACA ACAATGGCGA TTGGATGCCC GTTGCAGGCG ACAAACCCAA TGGAGTGCCC ACGGGCGCAG TTAAAGAAAC CCAGCCATGG GAAGCGGCTA ACAACCAAGT GACCACCACC AGTTTGACTT ATACCCACGC CAATATTGGT GGCCAACAAC TTAACCTGCA ACTCTTTAAT CAAGATTTTA AAGCGGTTTA TGGTGGCGGC TGTTTCGACA GTTTCTACGA TCCATCCTTC GAAGGTAGCG ACCAAGTAAT CCAGTGCGGT GTCGGCAGTA AAGGCGAAAG CTTGTACTAC GAGCAATCGC GTAATGCTTC AGTTAAATGG GGGTTAAAAA GCTCATTGAT TGCTAAAGAT ATTGCGGGTT CAGGGATTGA TGCGGCCTAC GGTGTCGACC TTTTCCGCGA TACCACAGAG CAAGATTTAG TGAAAACGGG TTTTTCGTGG GTTCCGGAAA GCACCTATGA CAACGTCGCG CCATACTTGC AGTTAGATTA TGATTTAATT GAAAATCTAA CCTTATCGAC CGGTGTTCGT TACGAGCATG CCGAATTAAG TGTCGATGAC TACAAAACCC TATGGGGTGC GGGAAATAAG CAAATTGCAG GCGGTTCAGC CACCTTCGAT GAAACCTTAT TCAACGTCGG TATCTCCTAC AAAATCACCC CAGACATTCG CGTTTATACC AGCTATAACC AAGGTTTTGG TATGCCGGAT ATCGGCCGTA TTCTGCGTGA TGGTAAAAGC TTTCCCGGCG ACAATCCCAA CATAGATGAC TCATTGGCAC TCACGCCGAT CGTCACAGAT AACGTCGAAG TTGGTGCCGA TTATCAAGGT AAATACTTAA GCGCTAAGTT TGCATATTAT CGTTCGGCCA CTGATTTTGG CTCACGTTTA GCCTTAAATG GCGATGGTTT CTACGACGTG AAGCGGGAAA AAAGCATGAT CGAGGGGATC GAAGCTAATG TTACCGCCTA CCTCACCAGC AATGATGATC TTGGCATGAA CATCGCCATT CAACAGGGCG AATACGATTC AAATGGTGAT AACAAAGTCG ATACCGATCT CGATGGCGCA AATATTTCGC CCAACCGTAT CAACCTGTTC TGGACCCATA ACTTCGATAA TGACATGTCG ACCCGCGTTC AAGCCAACTA CTACATGGAC CGCGACTTTA AAAATGCCGC GGGCAACAAG TATGCGGAAT TTGATGGCTA TACCACAGTC GATGCTTCCT TCTCTATGCC GCTTTACACT GGCACCCTGA GCTTAGGTCT GCAAAACCTG TTTAATAAGG ATTATTTCAA TTATTACTCA CAAACCATGG GTACAAATGA TCGTTATTTC AAAGGCATGG GACGTACTGC GACAATAGGC TACACCTTGC CTTTCTAA
|
Protein sequence | MTFKTSFVAL AVFAALSQSA AAQDAPDSSS NNKNKDIEKI TVTASRMDKS PSSIPNTVTI IDRAQLEEQF RTTKDLSTII GNLAPSFSPS RQKMSNTGET LRGRPPLIMI DGVPQSNPLR SGGRSGQTID PAMIERIEII HGANAMHGLG AQGGIINYIT KKPTGDSEQV ASFDVTVPDS MKSNGLSFGA SYAFSGESEF IDMIGSVSYR NNGVYYDANH NVVGVDTTQG ESMDSQSTDF FIKLGHNFDE SRLELMVNHY TADNNGDWMP VAGDKPNGVP TGAVKETQPW EAANNQVTTT SLTYTHANIG GQQLNLQLFN QDFKAVYGGG CFDSFYDPSF EGSDQVIQCG VGSKGESLYY EQSRNASVKW GLKSSLIAKD IAGSGIDAAY GVDLFRDTTE QDLVKTGFSW VPESTYDNVA PYLQLDYDLI ENLTLSTGVR YEHAELSVDD YKTLWGAGNK QIAGGSATFD ETLFNVGISY KITPDIRVYT SYNQGFGMPD IGRILRDGKS FPGDNPNIDD SLALTPIVTD NVEVGADYQG KYLSAKFAYY RSATDFGSRL ALNGDGFYDV KREKSMIEGI EANVTAYLTS NDDLGMNIAI QQGEYDSNGD NKVDTDLDGA NISPNRINLF WTHNFDNDMS TRVQANYYMD RDFKNAAGNK YAEFDGYTTV DASFSMPLYT GTLSLGLQNL FNKDYFNYYS QTMGTNDRYF KGMGRTATIG YTLPF
|
| |