| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0290 |
|---|
| Symbol | |
|---|
| ID | 4842558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 326033 |
|---|
| End bp | 327136 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640117506 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001048692 |
|---|
| Protein GI | 126172543 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCAAA TCATCGCTGA TCTGCAGTGT CAGATCCAAA ACCATAAACA CATTAAACTC
AACGCTGATT TTCGCTGCAA GGCTGGCGAA GTGCTCGCTG TAGTAGGGCC GTCTGGTGGT
GGCAAAACGA CCTTGCTACG GATGATCGCT GGGTTGAATC ATCCCGATAC GGGCCAAATC
TATTTTGGCG AACGGCCTTG GTTTGATGAC AAAGCGCTTA TCGCCTTGAG CCCACAGCAA
CGCCATATCG GTTATATGCC GCAGCATTTT GGCTTATTTC CGAATCTCAC TGCCTTAGAG
AATGTAGTCG CTGGGCTTGA TCATATCCCC AAATCTGAGC GTATTGTGCG CGCGAAAGAT
TGGCTTGAGC GAGTCAACCT ACAAGGCCTA CCCGATAGAT TGCCAGCGCA TTTATCTGGC
GGTCAGCGCC AGCGTGTTGC GCTTGCCCGT GCACTTGCCC GCGAACCTTC AGTGTTATTA
CTCGATGAGC CTTTTTCGGC AGTTGATCGG GAAACCCGCG AGCGTTTATA TCTCGAACTG
GCGCGCCTCA AAGAGCAGTT ACTCTGCCCA GTGATCATGG TTACCCATGA CTTAAATGAA
GCTTTGTTGC TAGCCGATTC GATGATTTTG ATCAGCCAAG GGAAGATGCT ACAGCAGGGC
GCACCTTTCG AGGTGTTGTC GCGGCCCCGC AATGAAGCGG TGGCGCGGCA GATGGGGCTA
AGGAATATTT TCGACGGTGA AGTGGTGTTT CAAGACAGCA CAAAAGACCT CACTTGGCTT
AAGTTTGGCG AGCAGTTAAT TGCCTGCGAC TATGGCAAAG ACCGCGCCGT TGGCAGCAAA
GTGCGTTGGG TGATCCCCAA CCAAGGCATT CGCTTTAACT CGATATCTAA CGGACGTTTA
TGCCGCAGTT TTAATAAGTT AGATGTCACT ATCGACGCTA TGCTGGTGAT GGGGGAATCG
GTCCGACTTA TTTGCTATGT CACAGGTACT CAGTTACAAC TTAACACCGA AGTCTCGCTG
CATTTTGCCC AAAAGCTTGC ACTCACGAAA GGAATGCAAA CCACAGTGGC ACTCAAATCC
GAACAAATTC ATATTTTGGA ATAA
|
|---|
| Protein sequence | MAQIIADLQC QIQNHKHIKL NADFRCKAGE VLAVVGPSGG GKTTLLRMIA GLNHPDTGQI
YFGERPWFDD KALIALSPQQ RHIGYMPQHF GLFPNLTALE NVVAGLDHIP KSERIVRAKD
WLERVNLQGL PDRLPAHLSG GQRQRVALAR ALAREPSVLL LDEPFSAVDR ETRERLYLEL
ARLKEQLLCP VIMVTHDLNE ALLLADSMIL ISQGKMLQQG APFEVLSRPR NEAVARQMGL
RNIFDGEVVF QDSTKDLTWL KFGEQLIACD YGKDRAVGSK VRWVIPNQGI RFNSISNGRL
CRSFNKLDVT IDAMLVMGES VRLICYVTGT QLQLNTEVSL HFAQKLALTK GMQTTVALKS
EQIHILE
|
|---|
| |