Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0249 |
Symbol | |
ID | 4842200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 283274 |
End bp | 285232 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640117466 |
Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
Protein accession | YP_001048652 |
Protein GI | 126172503 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTA AACCGCATTT ACCATCGACA CAGGCGTGGT TGGCCGATTC GTGGCAGCGC AGCATTGGCG CTGGCTTGTC AGAATTTCAG TTACCCCAAG AGCTTAGGCT CGACGCCAGC GAACTAAAGC AGAAACATGA GCAATATCAA ATGCTCATTG CATTAGTGCA ATCCCATGCT TTGCCCTTGT TCAATCAGTT GATGGCGCAT TCTAATAGCC GACTCTTGCT CTCCGATGCC GAGGGTTATG TGCTTAGGCA CTGGGGCGTG AGCCGCTACT CCACAAAATT GGCGGACGTG GCTTTGGATA TCGGGGTGAA TTGGCTCGAA CAGCACAAAG GCACCAATGC GATAGGGACG GCGCTCACCG CCAAACAAGC TGTATCTGTG GTGGGTGAGC AGCATTTTAT TCGTCAGAAT CGTTTTATGA GTTGCACCGC CTGCCCAATC TTTTCCCCCC AAGGTGAGAT GCTCGGGGTG ATAAATATCA CCAGTGAGCA GCAAAGACAC ACGCAGCAGA CGTTGATGTT AGTATCGAGC TTGGCGCAGC AGGTCGAGAC CGCGCTCTTG TGTCATCTGC CCGATAGCCG TTATCGAATC GATTTAGCGG CGCAGCCAAA CCTACTGAAT TCGGGTTGGC AGGGCATAGT GATTGCCGAT AGTGATGGTC GCATTGTGGG GTGCAATCCC ATGGCGAAAC AATTGCTTAG TCATGCCAAG GTTGGCGATT CCGTCGAGCA GTACTTAGGC GATAATTGGA GCCGTGCGGG TGGCTTTAAT CAGCATTTAG ACTTGCATCT ACAGACTCAG CCCTTAAATA TTCCCAGCAT CAAGAGTCGG GTAGCGACTA GTAATAAATC GCTTAATCAA CTGGGCGTGC GGTTTCGCGA CCCTCAACTT GAGCGCGCAT GGCAACATGC CAATAAGGTG ATCACCAAGC AAATTCCGCT GTTAGTGCTC GGTGAAACCG GCGTCGGTAA AGAGCAGTTT GTTAAAAAAC TCCACGCCCA GAGCGCGCGT CGCACCGAGC ATTTAGTGGC GGTGAACTGC GCTGCATTGC CTGCCGAGTT AGTCGAATCT GAACTCTTTG GTTATCAGGC GGGCGCGTTT ACTGGGGCAA ATCGTACTGG ATTTATCGGC AAAATTCGCC AAGCCCACGG CGGCTTCTTG TTTTTAGATG AAATTGGCGA AATGCCGCTG GCGGCCCAGA GTCGTTTACT TAGGGTGTTA CAGGAGCGCG AAGTGGTACC CGTTGGCAGT AATCAAAGTT TTAAAGTTGA TATTCAAATC ATTGCCGCGA CCCATATGGA TTTGGAGCAA CAAGTGGCGC AGGGGCTGTT TCGGCAGGAT TTATTCTATC GATTGAATGG TTTGCAAGTA CGTTTACCCG CGCTGCGTGA GCGGCAGGAT ATCGAGCGTA TTATCCATAA ATTGCATCGT AAACATCGCA TTGCGCCGCA GGAGATCTGC CCTGAGTTGT TAGGGCTGCT GATGCAACAC GACTGGCCCG GCAATTTGCG CGAGCTCGAT AATCTTATGC AAGTGGCTTG CTTGATGGCA GAAGGTGATG ACACCTTAAC TTGGCAGCAT TTACCCGATT ATCTTGCACA AAAATTAGCG TGCGAGCCGT TAAAAGTGGA TCCGTTAAAT GCACAGCTGT TAAACACACA GCTGTTAAAT GAAGAGCAGC CATTAGGTGA AGAGGTTAAA ACCGGTCAAA ACTCTGCATC ACATCCGCTG GCTGGCAAAG TTGTGAGTGG CAAAGTTACA AGTGGCAACA TTGCGGTGCA GCCAACTGCC AATGCGGTTC AATCGGATTC TCTCCACGAG GCGATTTATA GCAATGTGCT ACAGGCATAC CAAGCCTGTG GTGGCAATGT GAGCCAATGC GCCAAGCGTT TGGGGATCAG CCGTAATGCC TTGTATCGTA GATTAAAACA AATGGGACTT AAGGGTTAA
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Protein sequence | MAVKPHLPST QAWLADSWQR SIGAGLSEFQ LPQELRLDAS ELKQKHEQYQ MLIALVQSHA LPLFNQLMAH SNSRLLLSDA EGYVLRHWGV SRYSTKLADV ALDIGVNWLE QHKGTNAIGT ALTAKQAVSV VGEQHFIRQN RFMSCTACPI FSPQGEMLGV INITSEQQRH TQQTLMLVSS LAQQVETALL CHLPDSRYRI DLAAQPNLLN SGWQGIVIAD SDGRIVGCNP MAKQLLSHAK VGDSVEQYLG DNWSRAGGFN QHLDLHLQTQ PLNIPSIKSR VATSNKSLNQ LGVRFRDPQL ERAWQHANKV ITKQIPLLVL GETGVGKEQF VKKLHAQSAR RTEHLVAVNC AALPAELVES ELFGYQAGAF TGANRTGFIG KIRQAHGGFL FLDEIGEMPL AAQSRLLRVL QEREVVPVGS NQSFKVDIQI IAATHMDLEQ QVAQGLFRQD LFYRLNGLQV RLPALRERQD IERIIHKLHR KHRIAPQEIC PELLGLLMQH DWPGNLRELD NLMQVACLMA EGDDTLTWQH LPDYLAQKLA CEPLKVDPLN AQLLNTQLLN EEQPLGEEVK TGQNSASHPL AGKVVSGKVT SGNIAVQPTA NAVQSDSLHE AIYSNVLQAY QACGGNVSQC AKRLGISRNA LYRRLKQMGL KG
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