Gene Sbal_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_0145 
Symbol 
ID4842799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp167197 
End bp168243 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content49% 
IMG OID640117358 
Productpolysaccharide deacetylase 
Protein accessionYP_001048548 
Protein GI126172399 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAAC GTGTGCTGTT GGCACTCATA GGGCTAATGA CGTTTTCTGC CCATGCCGTG 
GTCATTCTGC AATATCACCA TGTGTCAGAA ACCACTCCTG CGGCCACAAG CGTGACGCCC
GCGCAATTTC GTGAGCAAAT GCAGTTTCTA GCCGATGATG GCTTTAAGGT GATCCCGCTT
TCTCAGGTAG TTGAAGCGAT AAAGCAAAAA CAAGATTTAC CTGCGAAAAC AGTCGCGATT
ACCTTCGACG ATGGTTATCG CAGCATAGCC ACTACGGCGC ATCCTATCCT AAAGGAATTT
GGATTTCCCT ACACCTTGTT TGTGGCAATT GAGCCGATTA AACAAAAGTT TACCGAGATG
ATGACTTGGG ATGAGCTGAT AACGCTATCC AAGGAAGGCG CCGATATTGC TAACCACAGT
TGGGCGCACG AACATTTGAT CCGCGCCTTA GAAAATGAAT CACAGGCGCA GTGGCTAGCG
CGAGTAAAGG CCAATATTTT AGACACAGAA AAAGCGATTG CAGATGCCAC AGGGCACAAT
TTCAAAATGC TGGCTTATCC CTACGGTGAG TACAATCAAG CCTTGCAGGA TATGTTAACC
GAGAATGGCT TTGTTGCCTT GGGGCAACAA TCGGGTGCCG CTGGGCCATA TTCGCCATTA
ACGGCGCTGC CGCGTTTCCC TGTTGCAGGA CAATATGCTG ATTTAAAAAG CCTTAAGGCC
AAGCTATACA GTTTAAATAT GCCTGTGATT GCGCAGAGTC CTAGTGATCC TGAGTTAAAG
GGCGGCCATT GGCGCCCAGA GCTTAAAGTC ACCCTAGATA TGAGCGATAT CTCGGCTAAG
CAAGTGATGT GTTATATCCA AGGCCAAGGT TCAAAACAGC CGACTTGGTT GAGTGAGAGC
GAGTTTAGTG TTCAAGCGGA TTTAGCCTTA CCAGCGGGTC GTTCGCGTTA CAACTGCACT
GCGCCGAGTA AGGCGCGCAA TGGCTACTAT TGGTTTTCTC AACCTTGGGT GAGGCCAAAG
GACGATGGCT CTTGGGTCAA AGAGTGA
 
Protein sequence
MVKRVLLALI GLMTFSAHAV VILQYHHVSE TTPAATSVTP AQFREQMQFL ADDGFKVIPL 
SQVVEAIKQK QDLPAKTVAI TFDDGYRSIA TTAHPILKEF GFPYTLFVAI EPIKQKFTEM
MTWDELITLS KEGADIANHS WAHEHLIRAL ENESQAQWLA RVKANILDTE KAIADATGHN
FKMLAYPYGE YNQALQDMLT ENGFVALGQQ SGAAGPYSPL TALPRFPVAG QYADLKSLKA
KLYSLNMPVI AQSPSDPELK GGHWRPELKV TLDMSDISAK QVMCYIQGQG SKQPTWLSES
EFSVQADLAL PAGRSRYNCT APSKARNGYY WFSQPWVRPK DDGSWVKE