| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0099 |
|---|
| Symbol | |
|---|
| ID | 4842961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 110147 |
|---|
| End bp | 113200 |
|---|
| Gene Length | 3054 bp |
|---|
| Protein Length | 1017 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640117313 |
|---|
| Product | CzcA family heavy metal efflux protein |
|---|
| Protein accession | YP_001048503 |
|---|
| Protein GI | 126172354 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCT CAGTCATCCG CTTTTCGCTT ACGCAGCGCC TATTTGTGCT GATTGTGGCG
CTGATTATTA TGTTAGCGGG AGCGCGAGCC TGGTTTTCCA TTCCCTTGGA TGCCTTTCCC
GATATTTCGC CCACCCAAGT GAAGATTATC CTCAAGGCGC CCGGCATGAC GCCGGAGGAA
ATTGAAGCGC AAATTACCGT GCCGATTGAA ACCGAACTGT TAGGTATTCC CCATCAATCG
ATTCTGCGCT CGACCACTAA ATACGCCATC AGCGATATCA CCCTCGATTT CGACGAAGGC
ACAGATATCT ATTGGGCGCG CCAGCAGGTG AGCGAACGCA TCGCCGCCGT GTGGGACAGT
TTTCCTGAAG GTGTAACGGG CGGCGTAGCG CCAATGAGTA CGCCGCTCAG CGAAATCTTT
ATGTTTTCAC TCGAAAATCC CAATCTATCG CTAATGGAAA GACGGCAGTT GCTCGAATGG
GAAATCCGCC CACTGTTACG CACCGTTGCA GGTGTCGCCG ATGTGAATAT CCTCGGTGGC
TATGCTAAAA GCTTTAGTGT GACCCCTAAA CCTGCGGCTA TGGCAGCTGC GGGGGTGAGC
TTTGCGGCGC TGCAACAGGC AATCGTTGAG AATAATCACA ACGAAGGTGC AGGTAAGCTC
ACCATTGGCA CAGATACCAT CATAGTGCGC GCCGAGGGTC GCATCGATGA TATCGACGAA
CTCAAACAAT TAGTGATCAA GGCCGATGAT GCCCGAGTGT ATCGACTGCA GGATTTGGCC
GATATTCAAA TTGGCCACTT AGCCCGCTAT GGCGCAGTCA CGAAAGATGG TAACGAAACC
GCCGAAGCGT TAATCATCGC CCTGAAAGAC GCTAATACCG CACAAGTGGT CAAAAATATT
AAGGAAAAGC TCGATCAAAT CAGCCTAACC TTGCCAGAAG GCAGCCAGAT AAACACCTTT
TACGACCGCG CAAATCTGAT CAATACCGCG ATAGATACTA TCTCCAATGC CTTATTCGAA
GCCGTAGTGC TAGTGATCAT CTTGCTGGCG TTGTTTTTAG GTAACGTGCG CGCCGCATTG
GTCGTGTCAC TCTCGCTGCC ACTCTCCGCG CTGATGACGT TTTTGATGAT GGATTACTTT
AATCTTTCTG CGAACTTAAT GAGCCTAGGC GGGCTGGTTA TCGCCATCGG CATGTTAGTG
GATTCATCTG TGGTCGTAGT CGAAAACATG GTGAATCTCA TCGCCACAAA GCAGAGATTA
CCGCGGCTGC ATTTAATTTT TCGCGCGACC AAGGACGTTG CCATTCCCGT GGTGTCGGGC
ACAGTGATCG TCATGATAGT GTTCTCGCCC TTGCTGACCT TGAGCGGGCT CGAAGGTAAA
CTCTTTACCC CAGTTGCGGT CACTATCGTG TTTGCCATGC TGTCGGCGCT GGTGTTGTCG
TTAACTGTTA TTCCGGTTAT CGCTTCTTAT CTCGTCAACG AAAAAGCCGC CAAGGAACCT
AAGGCGATTG AAAAGCTTAA ACAGCTTTAT CTGGGCAGCC TCAAGGGCAC GTTTAGCCAT
CAAAAACGCT TTATAGTGAT CGCCTTTAGC TTGCTTATCG TCAGCTTAGG CTTGTTCGGG
TTAGTGGGAA AAACCTTTAT GCCGACCTTA GATGAGGGCG ACATTATTCT GCAGCTGGAG
AAGTCTCCGT CGATTTCACT CGAGGCTTCG ATTGCCATCG ACAAGCAAAT TCAGCAAACT
TTGCTGGCTA AAGTTACTGA AATCAAACAA ATGGTGGCGC GTACTGGCGC GGATGAAATC
GGCTTAGATC CCATGGGACT CAATGAAACC GATGTGTTCT TAGAACTTTT GCCCCGCAGC
GAATGGCGCT TTGCAAATAA AGAAGCGCTT ATCGATGCGA TCCGCACTGT GTTATTGGAC
TATCCTGGCG TTAATTTTAA CTTCACTCAA CCGATACAAA TGCGCGTGTC GGAAATGCTC
ACCGGCAGCA TTGGCGACGT AGCGATCAAG GTCTTTGGTA ACGATATCGA CACCTTAGGT
CAGCTCACGA GCCAAATCCA ACAGCTGGTT AATGCCACCA GCGGCAGCGT CGATGTGAAA
ATGGCGATGA TCGAAGGCAG TCCTTTTATC AACCTCACCT TAGATAACGA GCTCGCCCGA
GGCTTTGGCA TGAGCACCAT GGAGTTTGCT CGCTACCTGA AAAGCCAGCT CGAAGGCGTG
ATCGTGACCG AAGTGCTGCA AGGTAAGAAG CGCACACCCG TGCTGATTGC TAACAATCAG
AGCCACTTAA GCAGCATTAA TGAACTTAAA AATCAGTTAC TGGTGATGCC AGATCACTCC
TTAAAACGCC TAAGTGATGT CGCCACCTTA AGCTATAAGC AAGGCCCCAT CCTTATCGAG
CGTGAGCAAG GGAATCGCTT TTCAGTGATA ACCACCAACG TGCAAGGTCG CGATATCGTG
AGTTTTGTAG AAGAGCTCAA CGCTAAAATT GCGCAGGAAA TCAAACTTCC GAGCGGTTAT
AGCGTGAGTT TTGGTGGCGA GTTTGAAAAC CAACAGCGGG CCACCAGCAA TTTACTACTA
GTGATACCCA TTGCTATCGC ACTGATCACT TTGATTTTAT TCACGACATT TGGTTCGCTT
GCCAAAGCGG GCTTAATCCT CGCTAACGTT CCCTTCGCTA TGATGGGCGG CATAGTTAGC
CTGTATTTAT CGGGGGAATA TTTGTCCGTG CCCGCCTCGG TTGGCTTTAT CGCCCTACTC
GGCGTCGCTG TGCTCAATGG CGTGGTGATG GTCAGCTATT ACGAACAAAC CAAGCACATG
TTCAGCAACC TGCGCGAACG GGTAGAACAA GGTGCGGCGC GGCGTTTACG TCCCATTTTG
ATGACGGCGA CAACGGCGAT GTTTGGTCTT ATGCCGCTGG TATTTGCCTC GGGCCCTGGG
GCTGAAATTC AAAAACCTTT AGCGATTGTG GTGATTGGCG GCCTGCTCAC TTCAACCATT
ACCACACTGT ATTTACTGCC AATTCTGTAT TTTTGGCTGG AGAAACGTAA ATGA
|
|---|
| Protein sequence | MLTSVIRFSL TQRLFVLIVA LIIMLAGARA WFSIPLDAFP DISPTQVKII LKAPGMTPEE
IEAQITVPIE TELLGIPHQS ILRSTTKYAI SDITLDFDEG TDIYWARQQV SERIAAVWDS
FPEGVTGGVA PMSTPLSEIF MFSLENPNLS LMERRQLLEW EIRPLLRTVA GVADVNILGG
YAKSFSVTPK PAAMAAAGVS FAALQQAIVE NNHNEGAGKL TIGTDTIIVR AEGRIDDIDE
LKQLVIKADD ARVYRLQDLA DIQIGHLARY GAVTKDGNET AEALIIALKD ANTAQVVKNI
KEKLDQISLT LPEGSQINTF YDRANLINTA IDTISNALFE AVVLVIILLA LFLGNVRAAL
VVSLSLPLSA LMTFLMMDYF NLSANLMSLG GLVIAIGMLV DSSVVVVENM VNLIATKQRL
PRLHLIFRAT KDVAIPVVSG TVIVMIVFSP LLTLSGLEGK LFTPVAVTIV FAMLSALVLS
LTVIPVIASY LVNEKAAKEP KAIEKLKQLY LGSLKGTFSH QKRFIVIAFS LLIVSLGLFG
LVGKTFMPTL DEGDIILQLE KSPSISLEAS IAIDKQIQQT LLAKVTEIKQ MVARTGADEI
GLDPMGLNET DVFLELLPRS EWRFANKEAL IDAIRTVLLD YPGVNFNFTQ PIQMRVSEML
TGSIGDVAIK VFGNDIDTLG QLTSQIQQLV NATSGSVDVK MAMIEGSPFI NLTLDNELAR
GFGMSTMEFA RYLKSQLEGV IVTEVLQGKK RTPVLIANNQ SHLSSINELK NQLLVMPDHS
LKRLSDVATL SYKQGPILIE REQGNRFSVI TTNVQGRDIV SFVEELNAKI AQEIKLPSGY
SVSFGGEFEN QQRATSNLLL VIPIAIALIT LILFTTFGSL AKAGLILANV PFAMMGGIVS
LYLSGEYLSV PASVGFIALL GVAVLNGVVM VSYYEQTKHM FSNLRERVEQ GAARRLRPIL
MTATTAMFGL MPLVFASGPG AEIQKPLAIV VIGGLLTSTI TTLYLLPILY FWLEKRK
|
|---|
| |