Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0057 |
Symbol | tdh |
ID | 4845107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 68540 |
End bp | 69565 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640117272 |
Product | L-threonine 3-dehydrogenase |
Protein accession | YP_001048462 |
Protein GI | 126172313 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0451496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAC TAAGCAAGTT AAAAGCCGAA AAAGGTATTT GGTTAGTCGA TGCGCCTAAG CCAGTAATGG GCCACAACGA TCTGCTGATC AAAATTAAAA AAACGGCGAT TTGTGGCACC GACATGCACA TCTACAACTG GGACGAGTGG TCACAAAAAA CCATTCCCGT TCCTATGGTT GTTGGCCATG AATATGTAGG CGAAGTGGTT GATATCGGAC AAGAAGTGCG TGGTTTTAAG ATTGGCGACC GCGTATCTGG CGAAGGTCAT ATTACCTGCG GCCACTGCCG TAACTGTCGC GCTGGCCGCA CCCATTTATG CCGCAACACC TCTGGTGTCG GTGTAAACCG TGAAGGTTCA TTCGCGGAAT ACTTAGTGAT TCCCGCCTTT AACGCCTTTA AAATCCCTGA TGACATCAGC GATGATTTAG CGTCAATCTT CGACCCGTTT GGTAACGCTG TGCACACAGC ATTATCCTTC GATTTAGTCG GTGAAGACGT GTTGATCACA GGCGCAGGTC CCATCGGCAT AATGGCTGCG GCAGTGTGTC GTCATGTAGG TGCGCGCCAT GTGGTGATCA CAGACGTTAA CGAATACCGC TTAGAGCTGG CCCGTAAAAT GGGTGCAACT CGCGCAGTCA ACGTGTCTAA AGAAAGCCTG AAAGACGTGA TGAAAGAACT GGGCATGACC GAAGGTTTCG ACGTCGGCTT AGAAATGTCT GGCGTACCAT CAGCCTTCCA CGCCATGTTA GATACCATGA ACCACGGCGG CAAAGTCGCT ATGCTGGGTA TTCCAGGTGG CGAAATGGCG ATTGATTGGA GCAAAGTGAT CTTCAAAGGT TTGGTCATTA AAGGCATCTA CGGCCGCGAA ATGTTCGAAA CTTGGTACAA AATGGCGAGC CTTATCCAAT CTGGCTTAGA TATTTCGCCT ATCATCACTC ACCACTTCAA GATTGATGAT TTCCAACAAG GTTTCGACGC CATGGGCTCA GGCCAATCGG GTAAAGTGAT CCTCAGCTGG GATTAA
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Protein sequence | MKALSKLKAE KGIWLVDAPK PVMGHNDLLI KIKKTAICGT DMHIYNWDEW SQKTIPVPMV VGHEYVGEVV DIGQEVRGFK IGDRVSGEGH ITCGHCRNCR AGRTHLCRNT SGVGVNREGS FAEYLVIPAF NAFKIPDDIS DDLASIFDPF GNAVHTALSF DLVGEDVLIT GAGPIGIMAA AVCRHVGARH VVITDVNEYR LELARKMGAT RAVNVSKESL KDVMKELGMT EGFDVGLEMS GVPSAFHAML DTMNHGGKVA MLGIPGGEMA IDWSKVIFKG LVIKGIYGRE MFETWYKMAS LIQSGLDISP IITHHFKIDD FQQGFDAMGS GQSGKVILSW D
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