| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0043 |
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| Symbol | |
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| ID | 4842351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 49791 |
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| End bp | 52241 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640117258 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001048448 |
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| Protein GI | 126172299 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCGTA AGCTTTCGCT CGCGGTACTG CTCCCTCTGT GTATGCTGAC ACTATATTTA
GTGTTGGTCA TAGGCGAGTA CCTGTTTGAA AGCGATCAAG TGCGTGCTGA ATTGGCGCAG
CGACAATCGA CACTGATAAA GCAGCAGTTG TTCCGGATGC AGAATGTGGT TCAATCGGCG
CAGGCTTTAC AGGATGTGGA GCGGATCGAG CAGGAGGTTT CCTTAGCTGC GCTGGATATG
GGCACTATGG TTTATATCTT AGTTGATGCT GATAGCCGTA TTCGTTTTGC AAACCATACT
GTTTGGCGCG ATAGCAATGC CATGCAAGTC ATTGATGGTT ATGATGCTAC TCGTGATCGT
GCTGTGGTTC AGGCTTTCCT GCCACAAATT CTTGTTAATC TCGAACGCTT AACCATTCAA
GCATATTATC CCGTCTTGCC TCAGTATGGT GGTGCGGTTG ATTTGATTTA TCTTGAAGCC
GATTTAGCGC CTTTAGTCGC CGAAGCTTCC GCTAAGTTAC AACAACGTTT TATGCGGGTT
TGGGGGCTGG GTGGATTATT ACTGATTGGT TTTACCTTCA TTCTCTATTT CCTATTGATC
CGTCCATTCC AAATATTAAG CGAGGCCGCT AAACAGGTAG GGACTTCTTC CTTTTCGACA
TCGATCCCAT GGAGCTCATC AGAAGTCTTA TCATTGCAAG CCAGTTTGCA GCAGGTACAT
GAACGTTTGA GTCGTGCCGT GAAACAGTTG AATGACAGCG AACTGCGCTG GCTGTTTGCG
GTGGAAGGCT CGCGGAACGG TATTTGGGAT TGGGATATCA GTACGGGTGA GGTTTTTCTG
TCTGATCGCT GGAAAGAGAT GATCGGTTAT GCACCGGATG AATTAGCGGG CGTATTCCAG
ACTTGGGAAG CGCGGTTACA TCCCGATGAT AGGGATATCG TACTGGATGC TTTGCAGGAG
TACGTTAGCG GTAAGAGTAA AGAATTTGAA AGTGTCCATC GACTGCGGCA TAGAGAGGGG
CATTATGTGT GGGTGCTGGA TCGCGGCATG TTGGTTGATT GGGACCCTCA AGGACGTCCG
ACTCGGATGA TCGGCATTCA TATGGATGTG TCAGAAAGTG CCAAAAACCA TGCTGCGATT
AATGAACTTG TGGATCAATC GGTTACGGGT CGCAAGATGT TACCCGATGT CTTTATGGCG
CGACTGTCGC AATTTTTAAC CCAAGGTAAT AGTTCAGGTC AATGGGGATC ATTGCTGCTT
GTTGAGGTGG ATAGGTTAGG CTTGGTCGCA ACTTTAAACT CTCACGAATT AGAGCGTTTA
CTCACGCAAG TGGCTGCACG TCTATCGAGT TATTTTACTG AGAATATTAC CGTTGGCCGA
TTGGAGTCCG GTGATTTTGT TTTGCTGGCT AAAGACTTAG CGATTGATGC TTCAGTGGCT
GCGCGTCGTG CTTTAGCGCT TGCGAGTGAG TTAAGGCAAG TGATTGCTCG ACCATTCCAT
TACGGTCATC ATCACTTTGA GCTCAGCGCG AATGTGGGGA TTTGTTTGCT CGACAGCATA
GAGACCTTAG ATCCAGCTTT AGTCATGCGC CGCGCCGAGC TAGCAACCTT GAGTGCTAAG
CGACCTGGGC AAGCGGGATG CGCTTTCTAT CATGCTGAGA TGGATTTACG TCAGAGCCGT
GATGAACAGT TACAACAGGA ATTACAGACA GCATTACAGC AAGATAGCAT GACGTTAATG
TTCCAACCTG TGATGAATGC GCACAGTGAA CTGGTCTCGG CTGAAGTGCT CACACGTTGG
TATCGTACCG ATGGCGAGTT TATCCCGCCT GCAGAGTTTG TAGCGTTAGC CGAACAGGGA
GGAATGATTG CTGAACTCGA TTTTTGGGTC GCTAATCGTG TGTGTCAGTT TATTCAGACA
TCCCATGCCC AAGGCTGGAG TTTGCCGACT TTAACTCTTA ATATCAGTGC ATTCTCATTT
GGGCAGGCAG ATTTTGTTGA TGCATTGATT GCGTTAGTCA AAGAGCATGG CATTGCGCCT
CATCAATTGG GTATTGAGCT CAATGAGGCT GCATTGTTAA TGCAACCACA GTTTGTGGCT
GAGCGCGTGT CTAAGTTAGT TGATGCTGGG ATAGGCATCG TCCTCGATCA TTTCGGTTCT
GGATCGAGTG CTTTGAGTTG TTTAGCCAAC CAGCCATTAG TTGCGGTTAA ATTGGATATG
AGTTGTATTG ATTCATTAGC CGCAATGCCA CAAAGAGTGA AGGCGTTAAT TGTCTCTGCG
CAGCAGTTTA ATTTGCACGT GGTGGCTAAA GGCGTTGAAT CACCCCAACA CTATCAAGCC
TTTGTTGAAT TTGGCTGTGA TGGTTATCAG GGCTATTTAT TCAGCCGAGC GCTAAACCAA
GCGGACTTTA TCCAGCTTGT TTGTCCTCGT CCTTTATTGC GAAGCGTTTA A
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| Protein sequence | MLRKLSLAVL LPLCMLTLYL VLVIGEYLFE SDQVRAELAQ RQSTLIKQQL FRMQNVVQSA
QALQDVERIE QEVSLAALDM GTMVYILVDA DSRIRFANHT VWRDSNAMQV IDGYDATRDR
AVVQAFLPQI LVNLERLTIQ AYYPVLPQYG GAVDLIYLEA DLAPLVAEAS AKLQQRFMRV
WGLGGLLLIG FTFILYFLLI RPFQILSEAA KQVGTSSFST SIPWSSSEVL SLQASLQQVH
ERLSRAVKQL NDSELRWLFA VEGSRNGIWD WDISTGEVFL SDRWKEMIGY APDELAGVFQ
TWEARLHPDD RDIVLDALQE YVSGKSKEFE SVHRLRHREG HYVWVLDRGM LVDWDPQGRP
TRMIGIHMDV SESAKNHAAI NELVDQSVTG RKMLPDVFMA RLSQFLTQGN SSGQWGSLLL
VEVDRLGLVA TLNSHELERL LTQVAARLSS YFTENITVGR LESGDFVLLA KDLAIDASVA
ARRALALASE LRQVIARPFH YGHHHFELSA NVGICLLDSI ETLDPALVMR RAELATLSAK
RPGQAGCAFY HAEMDLRQSR DEQLQQELQT ALQQDSMTLM FQPVMNAHSE LVSAEVLTRW
YRTDGEFIPP AEFVALAEQG GMIAELDFWV ANRVCQFIQT SHAQGWSLPT LTLNISAFSF
GQADFVDALI ALVKEHGIAP HQLGIELNEA ALLMQPQFVA ERVSKLVDAG IGIVLDHFGS
GSSALSCLAN QPLVAVKLDM SCIDSLAAMP QRVKALIVSA QQFNLHVVAK GVESPQHYQA
FVEFGCDGYQ GYLFSRALNQ ADFIQLVCPR PLLRSV
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