Gene Sbal_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_0030 
Symbol 
ID4842806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp33543 
End bp34829 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content51% 
IMG OID640117242 
Productsun protein 
Protein accessionYP_001048435 
Protein GI126172286 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTGC GCGCGCTGGC AGCGAAAGCC ATCTTCGAAG TATTAGAAAA AGGCGTGTCA 
CTCTCAGTGG CATTGCCCGA TCAACAAAAG CACCTTGCCA GCGGCAAAGA TAAAGCCCTA
CTCGCCGAGC TCTGTTACGG CGTGATGCGC ACTCTGCCGC AAATAGAGAA ACGCATCAGT
GAATGCCTAG CGAAACCACT CAAAGGTAAG CAAAGGATTA TCCACCAGCT GCTGATCATA
GGTTGCTATC AACTTTACTT CACTCGCATT CCAAGCCACG CCGCGATTTC AGAAACCGCC
GAAGCCTGTC GCCAGTTAAA ATTTGAAGGC ATGGTTAAGG TCGTTAACGG TGTACTGCGC
AACATTCAGC GTCAGCTTTC GCCGCTAAGC ACTGAATCAG ATACTTTAAG CTACAACACG
CCAGCTTGGT TGATTAAGCG CTTGAAAGAA GCCTATCCCG AGCAGTGGCA AGATATCATT
CAACAAAGCC ATGAACGCCC ACCTATGTGG CTGCGTAATA ATCGCTTATC CCAGAGCCGT
GCCGAATACC TTGCTGCCTT AGCCGAACTC GAGATTGAAG CGAGCGAAGG CAGCAGTGCC
GATGCCATTC TCTTGGCGCA TCCAAAGGAT GTCGCCACAC TGCCACGCTT CCACGAAGGC
GCGGCCTCAG TGCAAGATGG CGCGGCGCAA TGGGCGGCGA CATTACTGGC GCCACAAGCG
AATGAGTTAA TCCTCGATGC CTGCGCGGCG CCCGGTGGTA AAAGCTGTCA TCTACTCGAG
CTTGAGCCAA GTATCAAACT GGTTGCCGTC GACTTTGATG CCAAACGCCT CGAGCGCGTA
CAACAGAACC TTGACCGCTT GTCATTAAAA GCGGAGCTTA TCCATGGCGA TGCGGCCAAT
ATTGACTCAT GGTGGCAAGG TGGACAATTT GATCGTATCT TACTGGACGC GCCATGCTCG
GCCACGGGAG TGATCCGCCG CCATCCCGAT ATTAAATGGT TACGTAAAAA CCATGACATC
GAAGAACTGG CTGAACTACA ACAGCAAATT CTCGATCATT GCTGGAAGTG GCTCAAACCC
GGTGGCACGC TTCTTTATGC TACTTGCTCG ATTTTACCGC AGGAAAACCG CGACCAGATC
AGTGCGTTTT TAGAGAGAAC GGCAGATGCT AAGCTAGACA CACTCTCCCA GCAAAATTCG
CCACAGGATA TAGGTTGGCA AATCACGCCA GGACAAGACA ATATGGATGG GTTCTATTAC
GCCCGTTTAT TAAAAGCGAC CGATTAG
 
Protein sequence
MNLRALAAKA IFEVLEKGVS LSVALPDQQK HLASGKDKAL LAELCYGVMR TLPQIEKRIS 
ECLAKPLKGK QRIIHQLLII GCYQLYFTRI PSHAAISETA EACRQLKFEG MVKVVNGVLR
NIQRQLSPLS TESDTLSYNT PAWLIKRLKE AYPEQWQDII QQSHERPPMW LRNNRLSQSR
AEYLAALAEL EIEASEGSSA DAILLAHPKD VATLPRFHEG AASVQDGAAQ WAATLLAPQA
NELILDACAA PGGKSCHLLE LEPSIKLVAV DFDAKRLERV QQNLDRLSLK AELIHGDAAN
IDSWWQGGQF DRILLDAPCS ATGVIRRHPD IKWLRKNHDI EELAELQQQI LDHCWKWLKP
GGTLLYATCS ILPQENRDQI SAFLERTADA KLDTLSQQNS PQDIGWQITP GQDNMDGFYY
ARLLKATD