Gene Memar_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2324 
Symbol 
ID4847411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2309450 
End bp2311615 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content64% 
IMG OID640117034 
Producthypothetical protein 
Protein accessionYP_001048229 
Protein GI126180264 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGG CACGCGGACA TGACCCGGAA GCACCGGAAG CGCCAATGCA AGAGAAATCG 
CCACCAAACC GGCTGATCAA CGAACAGAGC CCTTACCTCC TCCAGCACGC CCGTAACCCC
GTCGACTGGT ACCCCTGGGG GGAGGAGGCT TTTTCACGGG CACGGGAGGA GGGAAAGCCG
ATATTCCTCT CCATCGGCTA CTCGGCCTGC CACTGGTGCC ATGTCATGGA GGAAGAGTCG
TTTGCCGACC AGCAGGTCGC GAAACTCTTA AACGACGTCT TTGTCTGTAT CAAGGTGGAT
CGCGAAGAGC GGCCGGATAT CGACCAGGTG TATATGGCGG CCGCCCACGC GCTGACCGGG
GCCGGAGGAT GGCCGCTCAC CATCCTCATG ACCGCCGATA AGAAACCCTT CTTTGCAGCG
AGTTACATCC CGAAGGAGAG CCGCTACGGG ATGACCGGTC TTTTAGACCT CATCCCCCGG
ATCAGCAAGG TCTGGCAGAC CCAGCGGCAG GGACTCGAGA ACGCCGGCGA CCAGGTGCTC
CAGGCGCTGC AGAGCGCGGC CAGAACTCCG CCGGAGGAGG GCGAACTCGC GGAGGCGGTC
CTCGACGAGG CTTACAACAT GTTCTTCCGG GTCTTCGACG GGGAGAACGG GGGGTTCGGG
GATGCGCCCA GGTTCCCTAC CCCGCACAAC CTCATCTTCC TGCTCCGGTA CGGGAACCGG
ACCGGGAAGG AGCCGGCATA CACGATGGTC GAGAAGACGC TGCACGCCAT GCGGCGGGGG
GGGATCTTCG ACCAGGTCGG CTATGGGTTC CACCGTTACT CGACGGACGC GGAGTGGTTC
GTCCCGCACT TCGAGAAGAT GCTCTACGAC CAGGCGCTCC TCGTCATGGC ATACACGGAG
GCTTACCTTG CGACGGGGAG AGAGGAGTTC GCGAGAACCG CCCGGGAGAC GATCGCCTAC
GTCCTGCGGG AGATGACCGA CCCGGATGGC GGCTTCTACT CGGCGGAGGA CGCCGACAGC
GAGGGCGAGG AGGGGAAGTT CTACCTCTGG ACGAAGGACG AGATCCTCGG CGTTCTCGGG
GAAGAGGACG GCGAGCGGTT TTCGCGGATC TTCAACGTCA CGGAGCCCGG GAACTACCGG
GAGCAGCCCG GAGGGAAGAG GACGGGCAGG AACATCCTCC GCCTGCGCCG GCCCCTCGCA
TCGTGGGCGC ACGAGTTCGA AACCCCGGAA GACGATCTGG CGTGGTCCGT GGAGGAGGGA
CGGCAGAAAC TTCTTGCGGC CCGCAAGCAG CGTGTCCGTC CGGGCAGGGA CGACAAGATC
CTCACCGACT GGAACGCCCT CATGATCGCC GCCCTCGCGA AAGCGGCCCG GGCCTTCGAC
GAACCGGACT ACCTGGCGGC GGCGGAGAGG GCGGCGGCGT TCGTCCTCGC CAATCTCCGC
CGGGAAGACG GGCGGCTCCT TCACCGCTAT CGGGGCGGCG AGGCCGGCCT CGCGGCGACC
CTCGACGACT ACGCGTTCAT GATCTGGGCG CTCATCGAGG TCTACGAGGC GTCGTTTGCC
CCCGGCTACC TCAAGACCGC CGTCGACCTC TCCCGGGACC TCATTGCCCG CTACTGGGAC
TGCAACGAAG GAGGGTTCTT CTTCGTGCCG GACGACGGGG ACGTCCCCGT CCGCCAGAAA
CCGGTCTACG ACGGGGCGAT CCCTTCCGGC AACAGCGTGG CCATGTACGC CCTCTTCGTC
CTCGGACGGA TGACGGCGAA CCTCGAACTC GAGGAGACGG CGGAGCGGAT ACGACGCGTC
TTTGCAGGAA CCGTCAGCGA GTCTCCTACC GCCTGCTCCC ACTTCCTCAC CGGCCTCGAG
TTCATGCTGG GGCCGAACTT CGAGGTGATC ATATCCGGTG TTCCGGACGC GGAGGATACG
AGAGCGATGA TCGGCGCCAT CCGGTCGCAC TACGCGCCCG ATGCCGTCAT CATCTTCCGT
CCTTCCGACG AAGAAGAACC GGAAATCGTG GAGGTAGCCG GGTTTACCCG CGATATCGTG
ATGATCGAGG AGAAGGCGAC GGCATACGTC TGCACCAACT ACGCCTGCGA CATCCCGACG
ACCGATCCCG ACGAGATGGT GCGGCTCGTG AAATCGGCCG GACGGCCGTC GGAACCGATC
GTCTGA
 
Protein sequence
MNPARGHDPE APEAPMQEKS PPNRLINEQS PYLLQHARNP VDWYPWGEEA FSRAREEGKP 
IFLSIGYSAC HWCHVMEEES FADQQVAKLL NDVFVCIKVD REERPDIDQV YMAAAHALTG
AGGWPLTILM TADKKPFFAA SYIPKESRYG MTGLLDLIPR ISKVWQTQRQ GLENAGDQVL
QALQSAARTP PEEGELAEAV LDEAYNMFFR VFDGENGGFG DAPRFPTPHN LIFLLRYGNR
TGKEPAYTMV EKTLHAMRRG GIFDQVGYGF HRYSTDAEWF VPHFEKMLYD QALLVMAYTE
AYLATGREEF ARTARETIAY VLREMTDPDG GFYSAEDADS EGEEGKFYLW TKDEILGVLG
EEDGERFSRI FNVTEPGNYR EQPGGKRTGR NILRLRRPLA SWAHEFETPE DDLAWSVEEG
RQKLLAARKQ RVRPGRDDKI LTDWNALMIA ALAKAARAFD EPDYLAAAER AAAFVLANLR
REDGRLLHRY RGGEAGLAAT LDDYAFMIWA LIEVYEASFA PGYLKTAVDL SRDLIARYWD
CNEGGFFFVP DDGDVPVRQK PVYDGAIPSG NSVAMYALFV LGRMTANLEL EETAERIRRV
FAGTVSESPT ACSHFLTGLE FMLGPNFEVI ISGVPDAEDT RAMIGAIRSH YAPDAVIIFR
PSDEEEPEIV EVAGFTRDIV MIEEKATAYV CTNYACDIPT TDPDEMVRLV KSAGRPSEPI
V