Gene Memar_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2239 
Symbol 
ID4848273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp2233280 
End bp2233702 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content57% 
IMG OID640116947 
ProductCopG family transcriptional regulator 
Protein accessionYP_001048144 
Protein GI126180179 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.849236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGGCG ATGCTGAACT TTCACGTATC GGGATCTCGC TGCCCAAGAA CCTCCTCGAT 
AAGTTCGACG AGATCCTGAG CCTCCGGGGG TATTCCTCCC GTTCCGAAGG GATACGGGAT 
TCAATACGAA GTTATATCAC TCACTACCAG TGGATCTCCG ACGTAAAAGG CGAGCGCCAG 
GGCGTCATCA CCATGGTCTA CGACCATGAC CAGCGTGGGC TGCTCCAGAC GCTCACCGAG 
ATCCAGCACC AGTATGCCAG CAGCATTCAG GCATCTCTGC ACTCGCACGT GACCCACAAC 
AAGTGCCTCG AAGTGATCCT GATCCGGGGG GACGGGGCCG TACTGAAGGA CATTACCGAG 
AGACTGATGG CGCAGAAAGG CGTTGAGGCG GTGAAACTCA CCACCATACC GGTCGAGGGT 
TAA
 
Protein sequence
MPGDAELSRI GISLPKNLLD KFDEILSLRG YSSRSEGIRD SIRSYITHYQ WISDVKGERQ 
GVITMVYDHD QRGLLQTLTE IQHQYASSIQ ASLHSHVTHN KCLEVILIRG DGAVLKDITE 
RLMAQKGVEA VKLTTIPVEG