Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2230 |
Symbol | |
ID | 4847060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 2222191 |
End bp | 2223342 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640116938 |
Product | nucleotidyl transferase |
Protein accession | YP_001048135 |
Protein GI | 126180170 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGGCAG TCATTCTAGC AGCGGGAGAA GGGAGCCGTC TGCGGCCGCT GACGAGAAGC AAGCCCAAGG CCATGCTCCC GGTCGCAAAC CGGCCGATCA TCGAGTACGT CATCGACGCC CTCCTGGAGA ACGGAATCCG CGACATCGTG GTGGTGGTCG GGTATCGCAA AGAGGAGGTC ATCCGGCACC TCAACAGGCT CGACGCCCCG ATCCAGGTCG TCGTCCAGGA GCGCCAGCTC GGGACCGCGG ATGCTCTCCG GGCGGCCGAG TCGGAGATCA CGGACAACTT CCTGGTTCTT CCCGGCGACA ACTACATCAA CGCCGAATCG ATAGCCCGGA TCAAGGAGGA GCAGAACGCC ATGCTCGTCG CCGAACACCC GAACCCCTCG AACTTCGGGG TCGTGGTGAT CAGGAACGGC ATCGTTCGCG AGATCGTCGA GAAACCCGAA GACGCCCCGA CGTTCACGGT ATCGACCGGG ATCTACTCGT TCACCCCCGA CGTCTTCTCC TACCTCCAGA CAAACGAGAT CCCCGACGCC CTCTCCACCA TGATCGCATC GGGCCGGCGG ATACGGGCGA TCCCGGCAGA CGACTGGCAG GACGCCGTCT ACCCCTGGGA TCTCCTGAAA CTGAACAGCC GGATGCTCAA GGAGATCAAG CCCCGGATCG CGGGGGCGGT CGACGCATCC GTCATTCATC GGGGCACCGT GCATATCGGG ACCGGAACGA CCATCGGCCC GAACACCGTC ATCTGCGGCC CCGTAACCAT CGGAAACAAC TGCAGCATCG GCCCGAACAC CGTGATCATG CCCGATACGA GCATCGGCGA CGGGGTGGTG CTCGAACCGT TCACCTACGT CGCCGACTCG CTCGTCATGA GCGACGTCAC GATCGGGTCG CATTCGAGGA TCGTCTCGGC GGTCTTCGGC CAGGGGTGCA TCCTCGCCGA CCACACCACC ACCTACCCGT CCGCGAGCCT CCTTGAGGTC GGAGGCCTCA TACAGAAGGA GGAATTCGGC GCAGTCCTCG GTGAGGGAGT CCGCGCGGCA CCATTCACAA CGTTTAAGAA CTGCATCGCC GGTAACAGTG TCACCGTCGG GGAGGGGAAG ACGGTGATCG GCATCATCGA GGACGGGACA CGGGTGATGT AG
|
Protein sequence | MQAVILAAGE GSRLRPLTRS KPKAMLPVAN RPIIEYVIDA LLENGIRDIV VVVGYRKEEV IRHLNRLDAP IQVVVQERQL GTADALRAAE SEITDNFLVL PGDNYINAES IARIKEEQNA MLVAEHPNPS NFGVVVIRNG IVREIVEKPE DAPTFTVSTG IYSFTPDVFS YLQTNEIPDA LSTMIASGRR IRAIPADDWQ DAVYPWDLLK LNSRMLKEIK PRIAGAVDAS VIHRGTVHIG TGTTIGPNTV ICGPVTIGNN CSIGPNTVIM PDTSIGDGVV LEPFTYVADS LVMSDVTIGS HSRIVSAVFG QGCILADHTT TYPSASLLEV GGLIQKEEFG AVLGEGVRAA PFTTFKNCIA GNSVTVGEGK TVIGIIEDGT RVM
|
| |