Gene Memar_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2010 
Symbol 
ID4848321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1999692 
End bp2000405 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content61% 
IMG OID640116716 
Producthypothetical protein 
Protein accessionYP_001047918 
Protein GI126179953 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID[TIGR00161] conserved hypothetical protein TIGR00161 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATA TAAAGGTCAT ATCCAGAGCG CTCGCCGGCG CCGAAAAAAC AGTGTTGATC 
GGCTTTCCCG GGAGCGGGCT CGTCGGGAGT ATTGCCCTGC AATATCTCGT CGAGCAGATG
GAATTCGAGC AAATCGGGGC GATCACGAGC AAATATTTCC CTCCGGTCGC CCTTATGTCG
AAGGGCGTGA TTAACGCTCC CGTACGTCTC TACGAGAAGG ATCACCTCGC CGCAGTCATC
TCCGACGTTC CCATCCACCC GGCGATCTGC TACGAGGTGG CGAACGGCAT CATGGACTGG
CTCGCGCAGT TCGACATCAA GGAGGTCGTC ACGATCGCAG GGATCATCAC GAACGAACCG
GAAAAGAGGG TTTTCGGGGT CGCGACCAGC AGCGGAGCGC TGCAGCACGT CGAGGAGAAG
ACGATCATCC TTCCGATGGG GAGCATCTCC GGCGTCGCGG CAAGCATCCT TACGGAGTGC
AAGACGCGGG GCATCCCGGG GATAGGGTTG CTCGGTGAGA CGGTGAACAC CCCCGACCCG
CGGTCGTCCG CGGCCACGAT CGAGGTTCTG AACCAGATCT ACGGCCTCAA TCTTGACATC
CAGCCGCTGC TCGAACAGGC GGTGGAGATC GAGGCTGCGA TGTCCCAGAT CGCCGAACAG
GTGCAGAAGA CCGAGGCCTC GCCCCGGAGA GAGCAGCTGC CGATGTACGG GTGA
 
Protein sequence
MDDIKVISRA LAGAEKTVLI GFPGSGLVGS IALQYLVEQM EFEQIGAITS KYFPPVALMS 
KGVINAPVRL YEKDHLAAVI SDVPIHPAIC YEVANGIMDW LAQFDIKEVV TIAGIITNEP
EKRVFGVATS SGALQHVEEK TIILPMGSIS GVAASILTEC KTRGIPGIGL LGETVNTPDP
RSSAATIEVL NQIYGLNLDI QPLLEQAVEI EAAMSQIAEQ VQKTEASPRR EQLPMYG