| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1964 |
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| Symbol | |
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| ID | 4847862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1958179 |
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| End bp | 1959510 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640116670 |
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| Product | signal recognition particle protein Srp54 |
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| Protein accession | YP_001047872 |
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| Protein GI | 126179907 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATA ATCTCGGTAC TTCCCTAAAG GACGCCGTCA AGAAACTCGC CGGCAAGACG
GTGATCGACC GGGCGGCGGT CGAAGAACTG GTGCGCGACC TGCAGCGGGC GCTCCTCTCC
GCCGACGTCA ACGTCAAACT CGTGATGCAC CTCTCCCAGA CGATCAAGCA GCGCGCCCTC
GATGAGGAAC CCCCGAAGGG GATGGGTGTC CGCGAGCACG TTCTCCGGAT CGTCTACCAG
GAACTCGTCC GGATGATGGG ATCGCCCGGC GAGGTGGCGC TCGAGCCCCA GACGATCCTG
ATGGCGGGAT TGCAGGGGAG CGGGAAGACC ACGACGACGG CAAAGCTCGC CCGCTACTTC
CAGCGCAAAG GGCTGCGGGT CGGGGTGATC TGCGCCGACA CCTTCCGGCC GGGCGCCTAC
GACCAGTTGA AGACGCTCTG CGACCGGATC AGCGTCCCCT GTTTCGGGGA TCCGAAGGAA
CCCGACGCAC TCAAGATCGT CCGGGAGGGC CTCCCGAAGT ACCGCAAGCT CTACGAAGTC
ATCATCATCG ATACCCAGGG GCGGCACGCC CTTGAGGAGA ACCTGATCGA GGAGATCGTC
AACATCAACG AGATCTCGCA CGCCGAGCAC AGGTGGCTCG TGATCGACGC GGCGCTCGGC
CAGCAGGCGA GCGAGCAGGC ACGCCGGTTC CACGAGGCGA TCGGGATCGA CGGCGTCCTG
GTCACGAAGA TGGACGGCAC GGCGAAAGGC GGCGGTGCGC TCTCGGCGGT TGCCGAGACG
CAGAGCGGCA TCGTCTTCAT CGGGAGCGGC GAGACGATCG ACGACCTCGA GCGGTTCGAC
CCGGACGGGT TCATCTCCCG GCTGCTCGGG ATGGGCGACT TAAAAGCGCT CGTCGAGCGG
GCGGAGGAGG CGGTCTCGGG CGAGGATCTC GACGTCAACG CCATGCTCAA GGGCAAGTTC
ACGCTCCGGG ACATGTACAA GCAGCTCGAG GCCCTGAACA AGATGGGGCC CTTGAAACAG
ATCATGAGTA TGCTCCCCCT CGGTGGCATG CAGATCCCGG ACGACGCCTA CGATATCACC
AGCACGAAGA TGCAGCGCTA CAAGGTGATC ATGGACTCGA TGACGCCCCC GGAACTCGAC
GACCCGTCGA CGCTCGGGAG CTCCCGGATC CAGCGCATCG CCCGGGGTGC CGGTGTGACG
CCCGACGACG TCCGCGACCT CATCAAATAC TACAAGATCA TGCAGCGTGC CCTGAAAGGC
ATGCGAGGCA TGGGCGGCGG CAAGTTCAAC ATGCAGCGCA TGATGAAGAA GTTCGGCGGA
CCCAGTAGAT GA
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| Protein sequence | MLDNLGTSLK DAVKKLAGKT VIDRAAVEEL VRDLQRALLS ADVNVKLVMH LSQTIKQRAL
DEEPPKGMGV REHVLRIVYQ ELVRMMGSPG EVALEPQTIL MAGLQGSGKT TTTAKLARYF
QRKGLRVGVI CADTFRPGAY DQLKTLCDRI SVPCFGDPKE PDALKIVREG LPKYRKLYEV
IIIDTQGRHA LEENLIEEIV NINEISHAEH RWLVIDAALG QQASEQARRF HEAIGIDGVL
VTKMDGTAKG GGALSAVAET QSGIVFIGSG ETIDDLERFD PDGFISRLLG MGDLKALVER
AEEAVSGEDL DVNAMLKGKF TLRDMYKQLE ALNKMGPLKQ IMSMLPLGGM QIPDDAYDIT
STKMQRYKVI MDSMTPPELD DPSTLGSSRI QRIARGAGVT PDDVRDLIKY YKIMQRALKG
MRGMGGGKFN MQRMMKKFGG PSR
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