| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1916 |
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| Symbol | |
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| ID | 4847109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1911235 |
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| End bp | 1912527 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640116622 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001047824 |
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| Protein GI | 126179859 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCTCC CCTCGCACCT CACGGTCAGG GACGGCCATC TCCGGATCGG CGAGCACGAC
ACGGTGGATC TCGCGGAACG GTTCGGCACC CCGCTTTACG TCACCGACGA GATGCGGATC
CGCGGGAACT TCCAGAGGCT TTCGGGCGCG CTCACCGCCC ACTACCCCAA AATCCGTGTC
CTCTACGCCG CGAAGGCAAA CGGCAACCTG GCGATCTTTA AGACGCTCGC ATCACAGGGC
GCCGGGGCCG ACGTCTTCTC TGCGGGAGAG GTCGCGCTCG CCCTCGCCGC CGGGATGCTT
CCTTCGTCGC TCCTCTTCAA CGGGAGCTCG AAGACCCCCG CCGACCTCGC CCTCGCGGTC
GAGAAGGGCA TCCGGGTCTC GGTGGACTCA CCAGACGAAC TCCGGCAGCT CGACCGCGCG
GCGGGAGCGG CGGGAACAAC CGTCGAGATC GCGTTCAGGG TCAACCCGGC AATCGAGGTC
CCCACCCACC CGAAGATCGC GACGGGGCTT GCGACGAGCA AGTTCGGTAT TCCCGCAGGG
CAGATCCTGG ATGCCTACAG GGAAGCGCTC GCGCTCGAGC ACGTAAAACC GGTCGGGATC
CACTGCCACA TCGGCTCGCA GATCCTCGAC GTGGAGCCCT TCGCCCACGA GGTTGAGGTG
CTGATCGACG TCGCCCGCGA TCTCCTCGAT ATCGGGGTCA ACCTCTCGTT CATCGATATC
GGGGGCGGCC TCGGCATCCC CTACCACCGG GAGACCGATC GCGCCCCGAC GCCGGAGGAG
TACGCGGAAG CGGTCATGCC GGTCTTCCTT CGCGGCATCA AAGAACTCGG GATCGAGCCC
GAACTCTGGG TCGAGCCGGG CCGGTGGCTC ATCGGCGACT CGACGGTCCT CTTGACAAGG
GTCAACTCCG TCAAGACCGC CCATAAGACC TTCGCGAACG TCGACGCCGG GTTCAACCTT
CTCGTCCGGC CGACGATGTA CGATTCTTAC CACGAGGTCG TGGCGGCGAA CAGGGCCGAC
GCGCCCGCCG TGCGGGAGTA CTCCGTCACG GGGCCGATCT GCGAGACCGG CGACATCCTC
GCGAAAGACC GGATGCTCCC CGAACTCGAG GCAGGCGATC TCATCGCGGT GCTGGACGCC
GGGGCCTACG GGTTTGCGAT GTCGTCGCAG TACAACAGCC GGCCCCGCTG CGCCGAGGTG
CTCCTCGCGG GCGAGAAGGC GGCGCTGATG CGCCGGGCCG AGACGATCGA CGACCTGACC
GCCCCCATGG TGACGGTGCC CTGGCAGGAG TAA
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| Protein sequence | MILPSHLTVR DGHLRIGEHD TVDLAERFGT PLYVTDEMRI RGNFQRLSGA LTAHYPKIRV
LYAAKANGNL AIFKTLASQG AGADVFSAGE VALALAAGML PSSLLFNGSS KTPADLALAV
EKGIRVSVDS PDELRQLDRA AGAAGTTVEI AFRVNPAIEV PTHPKIATGL ATSKFGIPAG
QILDAYREAL ALEHVKPVGI HCHIGSQILD VEPFAHEVEV LIDVARDLLD IGVNLSFIDI
GGGLGIPYHR ETDRAPTPEE YAEAVMPVFL RGIKELGIEP ELWVEPGRWL IGDSTVLLTR
VNSVKTAHKT FANVDAGFNL LVRPTMYDSY HEVVAANRAD APAVREYSVT GPICETGDIL
AKDRMLPELE AGDLIAVLDA GAYGFAMSSQ YNSRPRCAEV LLAGEKAALM RRAETIDDLT
APMVTVPWQE
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