Gene Memar_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1861 
Symbol 
ID4847704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1855073 
End bp1855759 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content62% 
IMG OID640116567 
Producthypothetical protein 
Protein accessionYP_001047769 
Protein GI126179804 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATACG AGATCACCGG AGACAACCTC CAGATGGTGA AACTCCGCCT CGCCCCCGGC 
GAGAAAGCCT GCGCCGAGGC CGGCGCCATG GTCAACATGA GCGGGAATAT GCAGATGACC
ACCAACATGA AGGGCGGGCT CTTCAAAGGG CTCAAGCGGA TGATGACCGG CGAAGGGCTC
TTCATGACCG AGTTCACCCC ACAGGGGGGA GAGGGGTTCG TCTCGTTCGC CGGGAACGTC
CCGGGGAAGA TCTTCACCCT CGACCTGAAC GGGAACGAGT TCATCGCCCA GAAAGACGCG
TTCCTCTGCT CCGAACAGGG CATCGACCTC GACATCGCGT TCACGAAGAA ACTCCGGTCG
GGCGTGTTCG GCGGCGAGGG GTTCATCCTC CAGAGGCTCT CCGGCAGCGG GAAGGCGTTC
CTCCACTGCT GCGGCGACAT CATGGAGATG ACGCTTGCGC CGGGCGAGGT GGTCAAGGTC
GAGACGGGCC TCGTCGTCGG GTTCGAGAGC ACCGTCGATT ACAGCATCCA GGTTGCCGGC
GGCGTGAAGA CCGTCTTCTT CGGCGGCGAA GGACTCTTCC TGACGACGCT GACCGGGCCG
GGCAAGGTCG TCATGCAGTC GATGGATATC GCGAAACTCG CGAGTTCCCT GATCCCCTAC
CTCCCAATCC AGAACTCGTC GGGATAG
 
Protein sequence
MQYEITGDNL QMVKLRLAPG EKACAEAGAM VNMSGNMQMT TNMKGGLFKG LKRMMTGEGL 
FMTEFTPQGG EGFVSFAGNV PGKIFTLDLN GNEFIAQKDA FLCSEQGIDL DIAFTKKLRS
GVFGGEGFIL QRLSGSGKAF LHCCGDIMEM TLAPGEVVKV ETGLVVGFES TVDYSIQVAG
GVKTVFFGGE GLFLTTLTGP GKVVMQSMDI AKLASSLIPY LPIQNSSG