Gene Memar_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1811 
Symbol 
ID4848112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1798696 
End bp1799484 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content60% 
IMG OID640116511 
Producthypothetical protein 
Protein accessionYP_001047719 
Protein GI126179754 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGC GCCCATGCAG TGTAGCGGGA ATGTTCTATC CTGCCGAGCC CAGGCATCTG 
GAGCAACTGC TGGAGACATT CTTCCGGAAG AGGGGACCGG GGATAACATC CCGGGGCATC
GTCTCTCCCC ATGCAGGATA CGTATACTCG GGGGAGACCG GAGCCTGTGC ATTCTCTACC
ATACCACCTG ATTTTGACGG CACATTTCTG GTCATCGGCC CGAGTCACCG TGGGTACATG
ACCTCTGCCT CCGCCGTACC GTGGGAGACG CCGCTCGGGA TCGTCGATGT CGATACGGAA
TTCATCGACG CGATGGATAT CGAGATAGAC GAGGCATCGC ACCAAAGCGA GCACTCGATC
GAGGTGCAGA TGCCGTTCAT AAAATACCGG TTCCCGAGAG CAAGGGCCGC ACCCGTTCTC
ATGGGAGAAC AGAGTTACGA AGCGGCAGAA AGCCTCGCGG AGCACCTGCT CCAGGCAGTC
GAGCACACGA AACGGGACGT TCGGATCGTC GCCTCGAGCG ACTTCTCCCA TTACGTCCCG
GACGAGGTGG CCCGCAAACA GGACCTCTAC GCGATCGAGG CGCTCAAAAC CCTGGACCTA
CCCGAGTTTT ACCGGCGGCT CCAGGAGACA CGTGCCACGG TCTGCGGCTA CGGCCCGATC
GCGACCATGT GCATCGCATG CCGGTCGCTC GGTGCGACGA GAGGGGAACT CTTGCGGTAT
ACGACCAGCG GCGATGTGAC GGAGGATTAC AATCAGGTAG TGGGGTATGC GGCGATAGCG
GTGGTGTGA
 
Protein sequence
MDMRPCSVAG MFYPAEPRHL EQLLETFFRK RGPGITSRGI VSPHAGYVYS GETGACAFST 
IPPDFDGTFL VIGPSHRGYM TSASAVPWET PLGIVDVDTE FIDAMDIEID EASHQSEHSI
EVQMPFIKYR FPRARAAPVL MGEQSYEAAE SLAEHLLQAV EHTKRDVRIV ASSDFSHYVP
DEVARKQDLY AIEALKTLDL PEFYRRLQET RATVCGYGPI ATMCIACRSL GATRGELLRY
TTSGDVTEDY NQVVGYAAIA VV