Gene Memar_1794 details

Gene Information

• Locus tag: Memar_1794
• ID: 4847853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1786854
• End bp: 1787417
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640116492
• Product: signal-transduction protein
• Protein accession: YP_001047702
• Protein GI: 126179737
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.190963
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAATA ATAGCGATGC CATCCGTTTC GAGACACGCA TACCAGTCAG GGAGGTCATG 
CAGAGCCATC CGACAACAAT CGATGTTGGT GAGACTGTCG CCCGGGCGGC GCAGATCATG 
TGCCGCGATG AGGTCGGCAG CTGCATTGTG CTGCAGAACA ACCTGCCCAC CGGGATCGTC 
ACGGAGGAGG ATATCAACTG CAAAGTCGTG GCTAAAGACT TGAAACCGGG TGATATTCGC 
GTCAGCGAGA TCATGAGCAC CCCCCTGATC ACGATCGGTG CCGACAAGCT CGTCGGGGAC 
GCCGCGGCAA TGATGGTGAA ACACCGTGTC CGCAGACTCC CCGTCGTTGA AGATCAGATG 
GTCATCGGGA TCGTGACTGT TCGGGACATC CTCACCGTCG CGGCCGAAGT GAACGAGCTG 
CTGGCGGATC TCATAGAAAT CAACCGCGAA GAGGAGTATG CCATGGGGGT CTGCGACCGG 
TGCGGGAACA TCTCCGACGA CTTATCAAGG GTCGACAACC TTATGCTCTG CCCCGCCTGT 
CGGGAAGAGG AGCAGTTGCT ATGA 

 

Protein sequence

MMNNSDAIRF ETRIPVREVM QSHPTTIDVG ETVARAAQIM CRDEVGSCIV LQNNLPTGIV 
TEEDINCKVV AKDLKPGDIR VSEIMSTPLI TIGADKLVGD AAAMMVKHRV RRLPVVEDQM 
VIGIVTVRDI LTVAAEVNEL LADLIEINRE EEYAMGVCDR CGNISDDLSR VDNLMLCPAC 
REEEQLL