Gene Memar_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1760 
Symbol 
ID4846055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1756880 
End bp1758463 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content63% 
IMG OID640116458 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001047668 
Protein GI126179703 
COG category[K] Transcription
[L] Replication, recombination and repair
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGA ATATTACCTT CCAGGAACTC AATATCTCGC CAAAGACACT CCGCGCAATA 
GAAGATATGG GATTTGAAGA GCCCACGCCC ATCCAGGTCA GCACCATACC GGCGATACTC
GACGGACGCG ACGTGACCGG CCAGGCACAG ACAGGAACAG GGAAGACAGC GGCGTTCGGC
GTCCCGGCGA TCGAGCGCGT CGACACCGGC AGCCGGGAGA CGCAGGTGCT CGTCCTCTCC
CCCACCCGGG AACTCGCCAT CCAGACTGCT GAAGAGTTTT CCCGTCTGGC GAAACACCAC
CAGGGCATCA ACATCCTCCC GATCTACGGC GGCCAGCCGA TCGACCGGCA GTTCCGGGCG
CTGCAACGCG GCGTCCAGAT CGTCGTCGGG ACGCCCGGCC GGGTGCTCGA CCACCTCGAC
CGGGGGACGC TCTCGTTTGG CGCGGTGAAG GTCGTCGTCC TCGATGAGGC CGACCAGATG
CTGGATATGG GATTCCGGGA AGACATCGAA AAGATCCTCG ACGATACCCC GCGGGACCGC
CAGACGATTC TCTTCTCGGC AACCCTCCCA AAACCCATCC TCGAGATCTC GAAAAAGTTC
CAGAAAAACC CCGAGTTCAT CTCGGTCGCG CGCAAGGAAG TGACCGTCCC GCAGATCGAG
CAGCTCTACC TCGAGGTGCG CAGCAGGGAC AGGCTCGAGA TCCTCACCCG GCTGCTCGAC
ATGTACGATC CCGACCTGAC CCTGATCTTC TCGAACACCA AGAGGGGTGT CGACGACCTG
ACCACTCACC TTCAGGCCCG CGGCTACTTC GCCGAAGGGC TTCACGGGGA CATGAAGCAG
ACCCTGCGCG ACCGGGTGAT GGCGAAATTC CGGGCGGGGT CGATCGATAT CCTGGTTGCG
ACGGACGTCG CCGCACGGGG CATCGATGTC GAGGACGTCG ACCTGGTCAT CAATTACGAC
GTCCCGCAGG ATATCGAGTA CTACATCCAC CGTATCGGCA GGACGGCACG AGCCGGGCGC
ACCGGGCGGG CCGTCACGTT CGTGGGCCCC AAGGAGTATT TCAAGCTCCG GACGATCCAG
AACTATACAA AAATTAAGAT CGCCCGGATC CCGCTCCCGA CCCAGGGAGA CGTCGAGGAG
AGCCGGACGC GCAAACTCAT CGACCGGGTA CACCAGACCA TCGACGAGGG CAATCTTGAC
CAGTACGCGA ACCTCGTCGA GCGGATCATC GCCGAGGATT ATACCTCGCT CGAGGTCGCC
GCCGCCCTCC TGAAACTGGA ACTCGGCGGG GTCGGCCAGG GCCAGCCGCA GGATATCAGG
CCTGCCCAGG GGCAGGCTCT TCTCAGGATC CCGGTCGGAA GAGAGCACCA GATCAGGCCG
AAGGATATCG TCGGAGCGCT CGCGGGCGAG ACCGGGATTC CCGGCAGCGC CATCGGCGCG
ATCAACATCT ACGACACCTA CTCCACCGTC GACGTGCCCC TTGACGCCGC CGAGCGGGTC
ATCGAGGGGA TGAAAGGAAA AACCATCGCA CGGGTCCGGC TGACCCGGCC GATCGAGATC
GTCGAGGCGG CCGGCGGGCG GTAA
 
Protein sequence
MEKNITFQEL NISPKTLRAI EDMGFEEPTP IQVSTIPAIL DGRDVTGQAQ TGTGKTAAFG 
VPAIERVDTG SRETQVLVLS PTRELAIQTA EEFSRLAKHH QGINILPIYG GQPIDRQFRA
LQRGVQIVVG TPGRVLDHLD RGTLSFGAVK VVVLDEADQM LDMGFREDIE KILDDTPRDR
QTILFSATLP KPILEISKKF QKNPEFISVA RKEVTVPQIE QLYLEVRSRD RLEILTRLLD
MYDPDLTLIF SNTKRGVDDL TTHLQARGYF AEGLHGDMKQ TLRDRVMAKF RAGSIDILVA
TDVAARGIDV EDVDLVINYD VPQDIEYYIH RIGRTARAGR TGRAVTFVGP KEYFKLRTIQ
NYTKIKIARI PLPTQGDVEE SRTRKLIDRV HQTIDEGNLD QYANLVERII AEDYTSLEVA
AALLKLELGG VGQGQPQDIR PAQGQALLRI PVGREHQIRP KDIVGALAGE TGIPGSAIGA
INIYDTYSTV DVPLDAAERV IEGMKGKTIA RVRLTRPIEI VEAAGGR