Gene Memar_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1719 
Symbol 
ID4846124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand+ 
Start bp1719480 
End bp1720085 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID640116417 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_001047628 
Protein GI126179663 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCA ATTGCGCGTT GTTCATAACC GTTCTGGCTA TCGGAGCGGC GGTTCTCATC 
TGCGGCTGCA CGGGCCTGCC GGGAGACGAC GTCCAGAACC AGACGAACGA AACACCTTCC 
GAAACGCCGG CCGGCGCAAA TCTGACAATC GCCAAGATGC TGGCCCGGGA CGGCAACTTC 
TCGGCGTTCA ACCGCGCGCT CGGTGCCGCC GGACTCAAGG GGACGCTCGC CGGGCCGGGC 
CCCTACACCG TCTTTGCGCC GACGGACGAG GCCTTTGACC TGATTCCGGA GACCATGATG 
GAAGAACTCT TCGACGATCC GAAGGGCAAC CTCGCGGAGA CCCTGCTCTA CCACATGGCT 
CCGGGGAGTT ATACGGCGGC CGAGATCGCC GCAAGCGACA CCGTTCCAAC CGTTCAGGGC 
AATCCAATCA CCGTCGACGC CGCCGGTGAG AGCGTGACGG TGGACGGTGC ACGGATGATC 
CGGGCAGATA TTCCGGCCGC GAACGGCGTC ATCCACGCCA TCGATGCGGT CATGATCCCG 
CCGGACGTGA CCCTGTCGCC GACGAACGAG ACCCCCGCAA ACGTGACGGC GAACACGACC 
GGGTGA
 
Protein sequence
MQTNCALFIT VLAIGAAVLI CGCTGLPGDD VQNQTNETPS ETPAGANLTI AKMLARDGNF 
SAFNRALGAA GLKGTLAGPG PYTVFAPTDE AFDLIPETMM EELFDDPKGN LAETLLYHMA 
PGSYTAAEIA ASDTVPTVQG NPITVDAAGE SVTVDGARMI RADIPAANGV IHAIDAVMIP 
PDVTLSPTNE TPANVTANTT G