Gene Memar_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1713 
Symbol 
ID4846771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1713037 
End bp1714302 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content67% 
IMG OID640116411 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001047622 
Protein GI126179657 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCCA TACCTGCACG ATACCTGATC TGCATAGCAC TCTGTGCATG CACCGTTGCC 
TGCCTCGTCA CCGCAGGCTG TTCCAACCCT TCCGGGCAGC AGCCGGAGAT CGGCTCCGAC
CTATCCGGCG ATCTCGTCGT CCATTTCATC GACGTCGGGC AGGGCGATTC GATCCTGATC
GAGTTCCGCG ATAAGACCAT GCTCATCGAT GCCGGCGAAC GCGGGATGGG GGAGCGCGTC
ATTGCATACC TCGATGAGAG GAACGTCGAG ACACTCGACG TGGTCGTGGC GACCCATGCG
CACTCCGATC ACATCGGAGG CCTTTCCGAC GTCATCTCCG CCTACCCGGT CGGCAGGTTC
GTCGATGCCG CGCAGCCGCA CCCGACCGCG ACCTACGAGA ACCTGCTCGT CCTGGTCGAA
GACCTGGGGA TACCCTACAC CGCGGCGGAG CGCGGGCAGT CGGTCGCCCT CGATCCCGAC
CTCGAGATCC TGATCCTGAA CCCGGGCGCA GAGCCGCTCG GCGACATAAA CGAGGACTCC
GTCGTCCTGA TGGTGACGTA TGGAGAGATC TCGTACCTCT TCACGGGCGA TGCCGGGACC
CCGGCAGAGG AGAGCATGGC GGAGGCCGGG CTCGACCTCG ATGCCGACGT CCTGAAAGTC
GGCCATCACG CGAGCCGGTA CGCCTCTTCG GCGGAGTTCC TCTCCTCGGT CAGCCCCGCG
ATCAGCGTCA TCGAGGTCGG CGAGGGGAAC GACTACGGCC ACCCCCATGA GGAAGCGGTC
GAACGCCTCG AGGCGACCGG CTCGCGCATC TACCGGACCG ACCTTGACGG AACCGTCATC
GTCGCCACCG ACGGAACGGC GCTCACCGTT GCCGCCGGCG GGGCACCCGC CGCCACCGTG
ACGGCCGGGG CAACGACCGC GGCCGCAACG GCGACCCCGA CAGCGACGGC GACGCCCGCT
CCCTCATCCG GCGTATACAT CAGCGACCTC GGCCTCCAGG AGGAGTGGAT CGCCGTCGCG
AACGCGGACG AAACGGCGGT CAACCTCACC GGCTGGACGA TCACCGACGA AGGGACGCGC
AACACCTACA CCTTCCCGGT CTACACGCTC GATCCGGGCG CCGACGTCAC CGTCCACTCC
GGGGCGGGCA ACGATACCGC GACCGACCTC TACTGGGGCC GGGGAAGCGC GGTCTGGAAC
AACGACGGCG ACCTCGCCAC GCTTGCCGAC GCGAACGGGA CCGTCGTCAG CACCATGGAG
CGGTGA
 
Protein sequence
MSSIPARYLI CIALCACTVA CLVTAGCSNP SGQQPEIGSD LSGDLVVHFI DVGQGDSILI 
EFRDKTMLID AGERGMGERV IAYLDERNVE TLDVVVATHA HSDHIGGLSD VISAYPVGRF
VDAAQPHPTA TYENLLVLVE DLGIPYTAAE RGQSVALDPD LEILILNPGA EPLGDINEDS
VVLMVTYGEI SYLFTGDAGT PAEESMAEAG LDLDADVLKV GHHASRYASS AEFLSSVSPA
ISVIEVGEGN DYGHPHEEAV ERLEATGSRI YRTDLDGTVI VATDGTALTV AAGGAPAATV
TAGATTAAAT ATPTATATPA PSSGVYISDL GLQEEWIAVA NADETAVNLT GWTITDEGTR
NTYTFPVYTL DPGADVTVHS GAGNDTATDL YWGRGSAVWN NDGDLATLAD ANGTVVSTME
R