| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1629 |
|---|
| Symbol | |
|---|
| ID | 4847806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1639447 |
|---|
| End bp | 1642386 |
|---|
| Gene Length | 2940 bp |
|---|
| Protein Length | 979 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640116322 |
|---|
| Product | phosphoribosylformylglycinamidine synthase |
|---|
| Protein accession | YP_001047540 |
|---|
| Protein GI | 126179575 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
|---|
| TIGRFAM ID | [TIGR01736] phosphoribosylformylglycinamidine synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.521268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGT ACGTCCACCG GATAGAGGTA CAATATACCC GCGATCCACG GCTGCCGACG
CGTACCGAGA GGTTCCGCTC GCTGGGTTTC CCCCTGCGCG AGCTGCACCT CGTCGACGTC
TATACCATAG CGACCGCCCG GAGGGACTTC TCCCCCGATG AGCTCTCGCA GATCGGCGCG
CAGCTCAGCA ACCCCGTCGT CCAGCGGTAC TCCGTAGACC GGCCGACCGA GGCCGGGTTC
GACTACGCGA TCGAGGTCGG GTTCCTGCCC GGGGTCACCG ACAACGCCGG GACGACGGCA
AAGCAGACCA TCGAGGACTA CTTCGGGTTC CGGTTCGGCG AAGGGGAGGC GGTCTTCTCG
TCGCAGCTCT ACCTCGTCTC CGGCGACCTC ACGCCCGAAT CCCTGGAGCG GCTCACCGTC
GCCCTCGCAA ACCCGCTCGT CAACCGGGTG CACGTCAGGA GCCGCGAGGA GTACGCCGGG
AAGGGAATGG ACGCAATCAC CCCCTTCGTC CACCTCCACG ACCTGCAGGC CGCCGGGACT
GTCGACCTCG ACCTCCCCGA CGCGGAACTC GCACGTATCG GAAAAGAGGG TATCCTCGAC
CCCGCAACAG GGGAGCGGCG CGGGCCGCTC GCCCTCGACC TCGCCCAGCT CCACGCGATC
CGCGACTACT TCCGGGGGCT CGGGCGGAAG CCGACGGACG TCGAGCTCGA GTCGCTCGCC
CAGACCTGGA GCGAGCACTG CAAGCACACG ATCTTTGCCT CGGCGATGGA CGACGTCCCC
CGGGGGCTTT ATAAGACCTG CATCCAGGCG GCCACCAACA CCGTCCGCGA GGCAAAGGGC
GATGACGACA TCTGCGTCTC GGTCTTCACC GACAACTCCG GCGCCATCAT CTTCGACGAC
GAGCACCTGG TGACCTGCAA GGTCGAGACG CACAACTCCC CCTCGGCCCT CGACCCCTTC
GGCGGCGCCC TCACCGGGAT CGTCGGGGTG AACCGCGACA CCATCGGGTT CGGCCTCGGC
GCCAAGCCCT GCATCAACAT CTACGGCTAC TGCGTCGGCG ACCCCGACAC AGAACCGGCC
CTCTTCCGCG GCAAGAACCG GACGAACCCC ATCCTCCCTC CCCGGCGGAT CTTCGAGGGC
GTCGTCCGCG GCATCGACGT CGGCGGCAAC TGCTCGGGCA TCCCGACGCC GCAGGGGTGG
TGCTACTTCC ACGACCGCTA CGTCGGTAAA CCACTCGTCT TCGCCGGCAC CGTCGGCGTG
ATGCCGCGCG CCAACAACGG GAGACTGCTC CACGAGAAGC AGGCCCTGCC CGGCGACCTC
GTCGTCATGG TCGGCGGCAG GGTCGGCAAG GACGGGATCC ACGGCGCCAC CTTCTCTTCA
GAAGCCCTCG ACCCCGCGAG CCCCGTGACC GCGGTCCAGA TCGGCGACCC GATCACCCAG
AAGAAGTTCT CCGACGTCAT CGTCAAGGAG GCCCGCGACC TCGACCTCTA CCGGAGCATC
ACCGACAACG GGGCGGGAGG AATCTCCTGC TCCGTCGCCG AGATGGCGAG GGAGTCGGGC
GGGTGCCACG TCCTCCTCGA CCGCGTTCCG CTGAAGTACC CCGGCATGGC GCCGTGGGAG
ATCTGGATCT CCGAGTCGCA GGAGCGGATG ACCCTCGCCG TCCCGGAAGA GAAGATCGAG
GCGTTCATGG ACCTGATGAA GAGGAGGGAG GTCGAGGCCA CCGTCATCGG GACGTTCACC
GATACGGGGA GATGCGTCGT GGAGTACGGC GGAGAGACCG TCATGGACGT CGACCTCGAC
TTCCTCCACG ACGGCCTCCC GAAGAAGCAC CTCCGGACAG AGCCCGTGGA GACGGCGTAT
CCCGAGCCAG ACTTCCCGTG CCCCGACCGG CTCGACGACC TCCTCCTCGC GATGCTCGCA
CGAAAGAACA TCTGCTCCAA AGAGTTCATC TCGACCCGGT ACGACCATAC CGTCCAGGGC
GGGCACGTCC TCGGGCCGGT GCAGGGAGCC GGGCGGGTCC AGACCACGGC CACCCTGACG
AAGGTCGTCC CCGGCTCGAT GAAGGGCGTC GGGCTCTCGC AGGGCCTCTT TCCGTCCTAC
TCCGAGCTCG ACCCCTACCG GATGGCGCTC GCCGCGATCG ACGCGGCGGT CCGGGGTTTG
ATCGCAATCG GCGTCCCGCT CGATACCATC GCGCTCCTCG ACAACTTCTG CTGGTGCTCC
TCCGACGAAC CGGCGAGGCT CTGGCAGCTC AAGCGCGCCG CGTTCGGGTG CTATGACGGC
GCGGTAGAGT TCGCAACGCC GTATATCTCC GGGAAAGACA GCATGTTCAA CGACTTCTCC
GGCTATGACG CCGACTCGAA CCCCGTGAAG GTCTCCGTGC CGCCGACGCT CCTCATCACC
TCGATCGGCG TCCACCCCGA CGTCACGACC GCGGTATCGA TGGACGCGAA GTTCGACGGC
GACCTCGTCT ACGTCGTGGG GGAGACCGGG GAAGAACTCG GCGGGTCGGA GTACCTCGCG
CACCTCGGTG TCGAGGGGGG CACGGTTCCG TCCCTCGATA TCGAGACGGC GAAGGTGCGC
TACGGCCGGA TGACCGGCGC GATTGAGAAA AACCTTCTCG CCTCCGCCTT CCCCGTCACC
CACGGGGGGC TCCTCGTCGC CCTTGCAAAG GTCGCGATCG CCGGGAGAGC CGGCATGGAT
CTGACAATCA CCGGCGGGAT GCGCCCGGAC ACCTACCTCT TCTCGGAGTC GCTCGGGCGG
CTCATTGTCA CGGTCGCCCC CGGCGATCGC GAAGCCTTCG AGGAGATCTT CGGCGGCGAC
GCGCACCTCC TCGGCAGCGT CGGCGGCGAA ACGTTCCGGG TGTCGGCAGG AAAAACGCTC
ATAGAACAGC CGGTGACGGC AATGGAAACT GCATATAAAG CGCCTTTCGG GGGGTACTGA
|
|---|
| Protein sequence | MASYVHRIEV QYTRDPRLPT RTERFRSLGF PLRELHLVDV YTIATARRDF SPDELSQIGA
QLSNPVVQRY SVDRPTEAGF DYAIEVGFLP GVTDNAGTTA KQTIEDYFGF RFGEGEAVFS
SQLYLVSGDL TPESLERLTV ALANPLVNRV HVRSREEYAG KGMDAITPFV HLHDLQAAGT
VDLDLPDAEL ARIGKEGILD PATGERRGPL ALDLAQLHAI RDYFRGLGRK PTDVELESLA
QTWSEHCKHT IFASAMDDVP RGLYKTCIQA ATNTVREAKG DDDICVSVFT DNSGAIIFDD
EHLVTCKVET HNSPSALDPF GGALTGIVGV NRDTIGFGLG AKPCINIYGY CVGDPDTEPA
LFRGKNRTNP ILPPRRIFEG VVRGIDVGGN CSGIPTPQGW CYFHDRYVGK PLVFAGTVGV
MPRANNGRLL HEKQALPGDL VVMVGGRVGK DGIHGATFSS EALDPASPVT AVQIGDPITQ
KKFSDVIVKE ARDLDLYRSI TDNGAGGISC SVAEMARESG GCHVLLDRVP LKYPGMAPWE
IWISESQERM TLAVPEEKIE AFMDLMKRRE VEATVIGTFT DTGRCVVEYG GETVMDVDLD
FLHDGLPKKH LRTEPVETAY PEPDFPCPDR LDDLLLAMLA RKNICSKEFI STRYDHTVQG
GHVLGPVQGA GRVQTTATLT KVVPGSMKGV GLSQGLFPSY SELDPYRMAL AAIDAAVRGL
IAIGVPLDTI ALLDNFCWCS SDEPARLWQL KRAAFGCYDG AVEFATPYIS GKDSMFNDFS
GYDADSNPVK VSVPPTLLIT SIGVHPDVTT AVSMDAKFDG DLVYVVGETG EELGGSEYLA
HLGVEGGTVP SLDIETAKVR YGRMTGAIEK NLLASAFPVT HGGLLVALAK VAIAGRAGMD
LTITGGMRPD TYLFSESLGR LIVTVAPGDR EAFEEIFGGD AHLLGSVGGE TFRVSAGKTL
IEQPVTAMET AYKAPFGGY
|
|---|
| |