| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1538 |
|---|
| Symbol | |
|---|
| ID | 4847230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1542666 |
|---|
| End bp | 1543415 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640116231 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047449 |
|---|
| Protein GI | 126179484 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3503] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00890695 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGAG AGCGTTACTG GGAGATCGAC CTCGCCCGGG GCGTCGCCGT CGTGACGATG
ATCGTCTTCC ACTCGGCCTT CGACCTCAAC TTCTTCGGCG TCCTGCCGCT CAACGTCTCC
GGCGGATTCC TCCGGACGCT CGCCTACCTG ACCGCATCGA CGTTCATCTT CCTCGTCGGG
CTCTCCTTCA CCATCAGTTA CGCCAGAGCC GCACGACGGC TCGATGGACG CGGCCTCGCG
CTCAAGTACG TCCGGCGCGG CCTCACTATC TTCGGCTACG GCCTCATCAT CACCGCCGTC
ACCCGGCTCT TGCTGCCGAA CGTCTACATC GTCTTCGGCA TCCTGCACTT CATCGGGCTT
GCGATCCTGC TCGCGCCGCT CTTCGTCCGG CTCGATCCGG AGAAACTCAT CATCACGAGC
ATCGCCTGCC TCATCGCCGG CTACGCGGCA AGCCTCGTCT CCGGCCCGTG GCCGCTCCTC
TGGCTTGGTA TCCGCCCCGA ATCATTTTCA AGCCTCGATT ACGTCCCGCT CCTCCCCTGG
TTCGGCCTCG TCCTGGTCGG GATGGCCTGC GGCCGTCTCT TCTACCCGGA CGGAAAACGG
AACATCTCAA TCCCGGTTGC GGAACCGGCG TTTGCCCGGC CGCTCGAGTT CCTGGGCCGG
CACTCGCTCG TCATCTACTT CCTGCACCAG CCGGTCGTCC TGCTCCTGAT CGCGGTGCTG
GCGCCGGGGG CGGTGACGTG GTTTTGGTGA
|
|---|
| Protein sequence | MPGERYWEID LARGVAVVTM IVFHSAFDLN FFGVLPLNVS GGFLRTLAYL TASTFIFLVG
LSFTISYARA ARRLDGRGLA LKYVRRGLTI FGYGLIITAV TRLLLPNVYI VFGILHFIGL
AILLAPLFVR LDPEKLIITS IACLIAGYAA SLVSGPWPLL WLGIRPESFS SLDYVPLLPW
FGLVLVGMAC GRLFYPDGKR NISIPVAEPA FARPLEFLGR HSLVIYFLHQ PVVLLLIAVL
APGAVTWFW
|
|---|
| |