Gene Memar_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1469 
Symbol 
ID4847629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1457560 
End bp1459101 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content64% 
IMG OID640116160 
Productglycosyl transferase family protein 
Protein accessionYP_001047380 
Protein GI126179415 
COG category[S] Function unknown 
COG ID[COG5305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTCCG GGCGGGGGAA CCTTTTTATC GGCACTCGTA TCTCTACCGC TCGGTCGATG 
ACAGCACCGG AGCGGCATGA GGTACAGCAC AGGGACACCG GGACGTTTAT TCGGGGCGGC
ATGAGCGCAA AAACCCGGCA CGGCACTCAG GAAAACGGCG CGGCGCTCTG GTACCTCCTG
GGCCTGACCG TCATCGGTGC CCTGCTGCGG TTCTACAACC TCGCCGGCAA CTCGCTCTGG
CTCGACGAGG CTGCGACCCT CTCGTTTGCC CGGCAGTCGC TTGCCGGCAT CTGGGAGAGC
ACTGCGGGCG GAGAGTTCAA CCCGCCGCTC TTCTACTGGC TGGAGCACGG GATACTCGTC
TTCGGGGAGA GCGAGTTCGT GCTCAGGTTT CTCCCCGCGC TCCTTGGCGT CCTGACGATC
CCGGTCGTAT ACTACATCGG CTCCGAGTTT AAGGACAGAA ACGTCGGGCT CATCGCCGCC
GCCCTCCTCG CGTTCTCGCC CTTTCACATA TTCTACTCCC AGGAGGCCCG GGCGTACACC
CCCATGCTCT TCTTCTTCTC CCTCGCCCTG CTCTCCTACG TGCGGGCGAG CAGATCGAAC
GAGACCCGCT CCTGGGTCCT CTTCGGGATC TTCTCCGCGG TCGCGTTCTG GATGCACTTC
TACGCCATCG TGCCGGTCGC CGTCCTCGTC CTCCATGCCC TGGTCGCCCG CGCCGGCGAG
ATCCGAAAAG ACGCCAGGAA CGCGAGCGGC CCTGCCCTCG GGCTCGTTGC CTTCGTCGTT
GCCGCCCTCC CTCTGCTCAT CGTGACTGTG AACCTCTTTC TCGCGAGAAC GTCGTCCGAC
CCGACGTTCG GCATGCAGGG GCTCGACGTC GTCTACCAGA CCCTTCTCGA GGCATCGGGA
CACAGCATCG CCGTCCTGGT TCCCTTCCTC CTCCTCTTCC TGCTCGGCGT CGCCTATACC
TGGCGCGAGG ACCGGAACGG GGCGCTCCTC CTCCTTTTCA TGATCTTCGT CCCGCTGGCG
GCGAGCCTCG TCCTCTCCTC ACGGATGCCG ATGTTCCCGC GCTACCTCAT CTACCTCCTC
CCGGTCTACT TCATCGGGAT CGCGTCGGCG TATCCCGCGC TCCGTGCCCT CGTGCGGGAG
AGGTGGGCGG TCGCAATCTT CATCGCCGCG GCAATCCTCG TCAGCGCCCC GTTTCTCTCC
ACCTACTACA CGACACCGCA GAAGAACGAC TGGCGGGGTT TCTCCGCGGA ACTCGGCGGG
ATGACCGGGG AAGGAGATCT CGTCGTCGTG CTGCCGTCCT ACATGGCGCT TCCGCTCGAC
TACTACTACA GCAACGCGAC CGACGGAACC ATCGAACTCG CGGCGACGAC CGGGGACGAC
CTCGCGGCTG TCCGTGACCG GTATCCCGAC CGGCGCGCGT TCTACGTCGT GACCCACGAT
ATCTTTGCCG CGAACCCCGG CGAGGATGCA CTGGGCTGGC TTGACGAGAA CGCGCAGTTT
ACCGGGCAGC ACACGGGAAT CTATCTCTTC AGGTCGACCT AG
 
Protein sequence
MHSGRGNLFI GTRISTARSM TAPERHEVQH RDTGTFIRGG MSAKTRHGTQ ENGAALWYLL 
GLTVIGALLR FYNLAGNSLW LDEAATLSFA RQSLAGIWES TAGGEFNPPL FYWLEHGILV
FGESEFVLRF LPALLGVLTI PVVYYIGSEF KDRNVGLIAA ALLAFSPFHI FYSQEARAYT
PMLFFFSLAL LSYVRASRSN ETRSWVLFGI FSAVAFWMHF YAIVPVAVLV LHALVARAGE
IRKDARNASG PALGLVAFVV AALPLLIVTV NLFLARTSSD PTFGMQGLDV VYQTLLEASG
HSIAVLVPFL LLFLLGVAYT WREDRNGALL LLFMIFVPLA ASLVLSSRMP MFPRYLIYLL
PVYFIGIASA YPALRALVRE RWAVAIFIAA AILVSAPFLS TYYTTPQKND WRGFSAELGG
MTGEGDLVVV LPSYMALPLD YYYSNATDGT IELAATTGDD LAAVRDRYPD RRAFYVVTHD
IFAANPGEDA LGWLDENAQF TGQHTGIYLF RST