Gene Memar_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1407 
Symbol 
ID4846944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1398231 
End bp1400201 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content62% 
IMG OID640116097 
ProductDNA gyrase, B subunit 
Protein accessionYP_001047318 
Protein GI126179353 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.68269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA CCTACGATGC TTCACACATC ACGGTACTGG AAGGCCTGAG GCCTGTGCGG 
GAACGTCCCG CCATGTACAT AGGCAGCACG GAGAGCCGGG GACTTCACCA CCTGGTCTAC
GAGGTCGTGG ACAACGCCGT AGACGAGGCT CTCGCCGGGT TCTGCGATCT GATCCAGGTG
ACCGTCAACC GGGACGGCTC GGTCTCGGTT GATGATAACG GCCGTGGCAT TCCGGTCGAC
CTCATGCCCC AGTACGGCAA GAGCGCGCTC GAGATCGTCC TCACCGTGCT GCACGCCGGC
GGAAAGTTCG ACAAGAATAC CTACCAGGTA TCCGGCGGCC TGCACGGCGT CGGTGTCTCG
GTCGTCAACG CCCTCTCGAG CTGGCTCGAT GCAACGGTCT TCAAGGACGG CAACGTCTAT
GCGATGCAGT TCCGGCAGGG TCTGGTCGCA AAACCGCTCG CGAGCCGCCC GGAGACCGAG
CACGAGATGG AGGCGCGGTA CGAGGAGCGC TATGGTGCCC GGGACGGGCA GCCGCTCGAC
TACGAACGGC TCCGGGGGAC CCGGATCACG TTCCAGCCCG ACCGTTCGAT CTTCGAGACC
GTCGAGTTCG ATTACGACGT GCTGGATCAC CGGCTCCGCG AACTCGCCTA CTTAAACAGC
GGCCTCACCA TTGTCCTCCG GGACGAACGC ACCGGCGATG TGGTCACCTA CTGCTTCGAG
GACGGGATCC GGCAGTTCGT CGCCCACCTC GGCGAGGGGA AGGAGAGCCT CCACGACGAT
ATCATCTACT TCCAGAAGCG CGACTCCGAG AGCAAGGTCG AGGTCGAGGT CGCCCTGCAG
TACAACAACT CATACTCGGA GACGATCTAT ACCTACGTCA ACAGCGTCAA CACCCGGGAG
GGCGGCACCC ACCTCGAAGG CTTCCGGAGC GCTCTCACCC GGGCGATCAA CAGCGCTGCC
CACCGTAACA ACCTCCTAAA AAACAACGAT GCCCAGGTCA AGGGTGAAGA CGTCCGGGAA
GGGCTCGCCT GTGTCATCAG CACCCGGGTG GCGAATCCGC AGTTCGAAGG GCAGACCAAG
ATGCGCCTTG GGAACAGCAA CGTCCGGGGC ATCGTGGACT CTCTCGTTTA CTCCTCGCTC
ACCGAGTACT TCGAGGAGCA CCCAAAGACC CTCCAGACGG TCGTGGACAA GGCGATGGCG
GCCGCCAGAG CAAGGGAAGC CGCCCGGACT GCACGTGAAC TCGCCCGGCG GAAGAGCACG
CTGGAGTCGA CCGGCCTCCC CGGGAAACTC GCCGACTGCC AGGAACGCGA CCCGGCAAAG
AGCGAACTCT ACATCGTGGA GGGAGATTCG GCAGGGGGTT CCGCGAAACA GGGGCGGGAT
AGGAAGTTCC AGGCGATCCT TCCCCTGCGG GGGAAGATCC TGAACGTCGA GAAGGCGTCG
GAGCACAAGA TCCTGAAGAA CGCCGAGATT CAGGCGCTGA TATCCGCGAT CGGCACCGGA
GTCGGCGACA GTTTCGACGC GGAACGGGCC CGGTACCACC GGATCATCCT GATGACGGAT
GCCGATGTCG ACGGAGCACA CATCCGGACG CTCCTCCTCA CGTTCTTCTA CCGCTACATG
GTGGGGCTCG TCGAAAACGG CTACATCTAC ATCGCCCAGC CGCCTCTCTA CCGGGTGGCG
AAGGGCAGAC AGGAACAGTA TGTCTACCGC GAAGAGGAGA TGCGAGAGAT CCTCGCCGAG
TGGGGCGAGA AAGGCGTCTC GATCCAGCGC TACAAGGGTC TCGGTGAGAT GAACGCCGGA
CAGCTCTGGA GCACCACGAT GGACCCGGCA AACCGGATTC TCAAGCAGGT GAAGATTGAG
GACGCCGCCT ACGCGAACGA AATATTCGAG AAACTTATGG GAGAGAACGT GGACGCCCGG
AGAGATTTCA TCCGCAGGCA TGCAAAGGAG GTGAGCAACC TTGACGTCTG A
 
Protein sequence
MTDTYDASHI TVLEGLRPVR ERPAMYIGST ESRGLHHLVY EVVDNAVDEA LAGFCDLIQV 
TVNRDGSVSV DDNGRGIPVD LMPQYGKSAL EIVLTVLHAG GKFDKNTYQV SGGLHGVGVS
VVNALSSWLD ATVFKDGNVY AMQFRQGLVA KPLASRPETE HEMEARYEER YGARDGQPLD
YERLRGTRIT FQPDRSIFET VEFDYDVLDH RLRELAYLNS GLTIVLRDER TGDVVTYCFE
DGIRQFVAHL GEGKESLHDD IIYFQKRDSE SKVEVEVALQ YNNSYSETIY TYVNSVNTRE
GGTHLEGFRS ALTRAINSAA HRNNLLKNND AQVKGEDVRE GLACVISTRV ANPQFEGQTK
MRLGNSNVRG IVDSLVYSSL TEYFEEHPKT LQTVVDKAMA AARAREAART ARELARRKST
LESTGLPGKL ADCQERDPAK SELYIVEGDS AGGSAKQGRD RKFQAILPLR GKILNVEKAS
EHKILKNAEI QALISAIGTG VGDSFDAERA RYHRIILMTD ADVDGAHIRT LLLTFFYRYM
VGLVENGYIY IAQPPLYRVA KGRQEQYVYR EEEMREILAE WGEKGVSIQR YKGLGEMNAG
QLWSTTMDPA NRILKQVKIE DAAYANEIFE KLMGENVDAR RDFIRRHAKE VSNLDV