Gene Memar_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1349 
Symbol 
ID4847273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1337260 
End bp1339356 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content68% 
IMG OID640116040 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001047261 
Protein GI126179296 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTGC TCGGTGAAAG GGCGACCCGT CTTTTGAGCG ATCGCGCCGG CGACAGATCG 
GGATATGCGC CCGGACACCC TTTAAGTGAG ACGCAGTTAA GGTTGCAGGG TTATGATAGA
GACCTGCGCC CGAACGACTC CGGCCGGAGG CAGGCCGTGA CGGAGCGTGA GGAGTGCCCG
TCCTGCCCCC GATGCCGGGC CGGGATCTGC GAGATTCACA GGCCGGTCGT CGGGCGCCGG
GAGATCGCGG TCTTCGGGAT CTCGGGCATC CTCCTCCTTT CGGGGATACT CGTGAACTAC
CTCACCCCGT ATCCCCTCGC CGGCACGGCC CTGCTGCTCG CTGCCGCGGC TATATCCGGC
TACGACGTCC TGAGAGCCGG ATTCTTTGCT CTCATCCGGC TCCGGTTCAG CATCGCCGTG
CTCATATCCA TCGCGGCGGC AGGGGCGTTC CTGACCGGAA ACCCGGCCGA AGGGGCGACC
GTGCTCTACC TCTACGCCGT CGCCGAGTTC ATGGAGGAGT ACGCGGCCGG GAGGGCAGAG
CGCTCGATAG CCTCGCTCCT CGATCTCACG CCGCAGACCG CCCGGGTCAG GCGAGACGAT
GGGGAGGTGA CCGTCCCGGT CGATGACGTC GGCATCGGGG AGACCGTGAT CGCGAGACCG
GGCGACACCG TTCCGCTCGA CGGCGTCGTC ACTGCCGGCG GATCATCGGT CGATCAGGCG
GCGATCACCG GTGAGAGCGT CCCGGTGGCA AAGGGAGTCG GGGACGGCGT CTACGCCGGG
ACGCGGAATC TCGACGGGTA CCTCGAGGTC CGGGTGACGA AACCGGAACG AGAGAGCACG
ATAGCCCGGG TCGCCGCCCT GGTCGCGGAG GCCCAGGCCC ACACCTCTCC CACCGAGGCG
TTCATCGAAC GGTTTTCGCG CTACTACACG CCGGCGGTCA TTCTCGGCGC CGCCCTCCTC
GTCGTGGTCC CGCCGCTCGC CTTCGGCGTC CCGTTCCTCG AGGCGTTCTA CCGGGCGCTG
GTCCTGCTCG TCATCGCCTG TCCCTGTGCG CTCGCGATCT CCACCCCGGT CTCGATGGTC
TCGGGGATCA CGACCGCGGC GCATAATGGC GTGCTGATCA AGGGCAGGGA CTCGCTCGAG
GCCGTGGGGC TCGCCCGGGT GGTCGTCTTC GACAAGACCG GGACGCTCAC GGCCGGGAGG
CTCGAGGTGG ACAACGTGAT CGGGTTCGGG ATCCCGGAGG CGGAGGTGCT CGCCGTCGCC
GTGTCGCTCG AGTCCCGTTC GGGTCACCCG ATCGCGGAGG CGATCCGGCG GCGGGCGGAG
GAGGAGGGCG CCGTCCTGCA GGACGTCGGG GAGTTCGTCT CGATTGCAGG AAGAGGCGTC
CGGGGACGGA TCGGCGGTGC GGCCTACGTG CTCGGAAACG TTGCGCTCTT TGTCGACGGA
GATGCTCCGG CATGGCGGGC GGATTACGAC CGGCTGGAGA GCGAAGGGAA GACCGTCGTC
CTCGCCGGCA CCGCCTCAGG GGTGCTTGGG CTTATCGCCC TCTCGGACGT GGTAAAGAAG
GATGCAAAAA AGACGGTTGC CGCTCTCCGG GCGCGAGGAA TCCGGACGGT GATGCTCACC
GGGGACAACG AGCGCGTCGG GGGGGCGGTG GCCCGCCGCA TCGGGATCGA CGAGTGCCAT
GCCGGGCTCC TGCCGGAGGA TAAGGTGACG ATGGTCGAGC GGCTGATGGA CCGCTACGGG
CTCGTGGTGA TGGTCGGCGA CGGCGTGAAC GACGCGCCGG CGCTTGCGCG GGCGAACGTC
GGGGTCGCGA TGGGGGCGAT AGGCTCAGAC GTCGCGATCG AGGCCGCCGA CATCGTCGTG
ATGGAGGACG ACATCTCGCG GGTCGCCTAC CTCGTCGCCC TCTCGGAGAA GACGGTCTCG
GTCGTCCGGC AGAACGTCAT AGCGGCGCTC GTGGTGAAAC TCGGCATCGC CGGGCTCGCC
GTCCTCGGGC TGGTCACGCT CTGGATGGCG GTGGCGTTCG GGGACATGGG CCTCTCGCTT
GCGGTCATCG CGAACGCTCT CAGGATAGGC CGGCCGGATT CCGGCAGCCC TCCATGA
 
Protein sequence
MLLLGERATR LLSDRAGDRS GYAPGHPLSE TQLRLQGYDR DLRPNDSGRR QAVTEREECP 
SCPRCRAGIC EIHRPVVGRR EIAVFGISGI LLLSGILVNY LTPYPLAGTA LLLAAAAISG
YDVLRAGFFA LIRLRFSIAV LISIAAAGAF LTGNPAEGAT VLYLYAVAEF MEEYAAGRAE
RSIASLLDLT PQTARVRRDD GEVTVPVDDV GIGETVIARP GDTVPLDGVV TAGGSSVDQA
AITGESVPVA KGVGDGVYAG TRNLDGYLEV RVTKPEREST IARVAALVAE AQAHTSPTEA
FIERFSRYYT PAVILGAALL VVVPPLAFGV PFLEAFYRAL VLLVIACPCA LAISTPVSMV
SGITTAAHNG VLIKGRDSLE AVGLARVVVF DKTGTLTAGR LEVDNVIGFG IPEAEVLAVA
VSLESRSGHP IAEAIRRRAE EEGAVLQDVG EFVSIAGRGV RGRIGGAAYV LGNVALFVDG
DAPAWRADYD RLESEGKTVV LAGTASGVLG LIALSDVVKK DAKKTVAALR ARGIRTVMLT
GDNERVGGAV ARRIGIDECH AGLLPEDKVT MVERLMDRYG LVVMVGDGVN DAPALARANV
GVAMGAIGSD VAIEAADIVV MEDDISRVAY LVALSEKTVS VVRQNVIAAL VVKLGIAGLA
VLGLVTLWMA VAFGDMGLSL AVIANALRIG RPDSGSPP