Gene Memar_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1295 
Symbol 
ID4846446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand+ 
Start bp1278069 
End bp1278698 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content61% 
IMG OID640115986 
Productdehydroquinase class I 
Protein accessionYP_001047207 
Protein GI126179242 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0710] 3-dehydroquinate dehydratase 
TIGRFAM ID[TIGR01093] 3-dehydroquinate dehydratase, type I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0951135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG TCGTCTCTGT GGAGAATGCC GCCGCTATCA ACGAAGTGGC GGAGTACAAC 
CCGACGTTCA TCGAGATCAG GCTCGATCGG ATGGAGGGGG ATCTGCAGGA TCAGGTTCGT 
GCCATCCGGG AGAAGACCGA TATCCCGCTG ATTGCCACGC TCAGGAGCAG GGACGAGGGA 
GGCCGGTTTG TCGGCGATGC GGATCTCTGG GCCCGGATCG TCGGGCCGAT AGCACGATAC 
GTCGATATCG TGGACGTGGA AGCACGGTAC CGGGATCACG CGCCGTTCAT CAAGAGCCAG 
GGAGTCCAGA TTCTTGCATC GCTCCACACG AACGAGATGC CCACCGTGCC CGAGCTCGGG 
AGGATCGACG AGATGCTCCG GTCATACGGC GATATCCCGA AGATCGTCGT GCGGCCTAAA 
ACCCGGGAAG ACCTCTTCGA ACTCGTCCTC TTCACCCACC AGGCCCAGAA ACCGATCTGC 
ACGAGCATCA TGGGCGCCGA GTTCCGCTAC GCCCGCGCAA TCCTGCCCCT CTTCGGGTCG 
GAGTTCACGT TCAGCCATGC CGGCGCCCCG ACGGCCGAAG GGCAGTACCA CATACGGGAG 
ATGCGGCAAC TTGCGGATCT GTTGAAGTGA
 
Protein sequence
MKIVVSVENA AAINEVAEYN PTFIEIRLDR MEGDLQDQVR AIREKTDIPL IATLRSRDEG 
GRFVGDADLW ARIVGPIARY VDIVDVEARY RDHAPFIKSQ GVQILASLHT NEMPTVPELG 
RIDEMLRSYG DIPKIVVRPK TREDLFELVL FTHQAQKPIC TSIMGAEFRY ARAILPLFGS 
EFTFSHAGAP TAEGQYHIRE MRQLADLLK