Gene Memar_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1277 
Symbol 
ID4847255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1260298 
End bp1261200 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content58% 
IMG OID640115967 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_001047189 
Protein GI126179224 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGGT GCCCGGACTG CAAACTGACT GATCCGCTGA TTGCGGACCT GGAAAGCACC 
TACGACGGCG CCCTCACGAT CGAATGGATC GACGTCGAGA CTGTGGACAG TTGGGAGCGA
TGGAACGCGT ACGCATTTCT CGAAGTCCCG GCCGTAGTCG TGAACGGCAC CGTCACAATT
CCCAAAGAGG AGATCACCGA CGAGAACCTC AGGGCGGCGA TCGAGCAGTC CCTTGCCGGT
GCTGAGCCGC AGGAGAACTC GCCGCCGATT AACTGGAATA TCCCGTTTGC ATTCTCCCTG
GGCCTTTTCT CCGGGTTCTC ACCCTGCCTG ATGGCAATAC TCGGATTCAT ACTGGTGTAC
GTCACCGGGT CGGGCAAAGG GCTGAGAAGC AGTCTCCTGA ACTCTGTAAT ATTCGGTCTG
GGGCTGGTAG CCGCGTATAT CGTCCTGGGG TGCTGCTTCC TGCTGGCAGG GATGTCCCTT
GGTGGTTTCG GTCCGTACCT CGCCGTCGCG GCAGGACTGA TCACGATACT CACCGGGGTG
AACCTGCTTG GGTTGATAAA ACTCCCGATC TCCGCGGACG ACTACGTTAA GTCATCCATA
CGGAAGCATG CAACCACGCT TGCCGGGTTG TTCATTCTGG GCATGATATT TTCAATCGTC
AAGGCCCCGT GCGCCGCACC GATGCTCCTC GTCCTGCTGA GCAGAATCCT GATCGACGGC
ACCGTACAGG ATTTATCGCT CCTGCTGGTC TTCGGAGCCG GGGTGCTCAC GCCGTTTCTC
GGCGTCGGAG TCCTCGGTGG ATACGCCTCA TCAAGCAGGA TACGGGAGTA CAGGGACGTT
ATTCGAGCGG GAAGCGGGAT CCTGTTGATA GGATTCGGGG TCTGGCTCAT CTTCTGGGGG
TAA
 
Protein sequence
MDRCPDCKLT DPLIADLEST YDGALTIEWI DVETVDSWER WNAYAFLEVP AVVVNGTVTI 
PKEEITDENL RAAIEQSLAG AEPQENSPPI NWNIPFAFSL GLFSGFSPCL MAILGFILVY
VTGSGKGLRS SLLNSVIFGL GLVAAYIVLG CCFLLAGMSL GGFGPYLAVA AGLITILTGV
NLLGLIKLPI SADDYVKSSI RKHATTLAGL FILGMIFSIV KAPCAAPMLL VLLSRILIDG
TVQDLSLLLV FGAGVLTPFL GVGVLGGYAS SSRIREYRDV IRAGSGILLI GFGVWLIFWG