| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1199 |
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| Symbol | |
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| ID | 4845977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1173716 |
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| End bp | 1175608 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640115889 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001047112 |
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| Protein GI | 126179147 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
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| TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0390608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATCG AAGAGAAACT CCAGGAGCTT AAGGAGCAGA TCAACAAGAT TGTTCCCGGT
GGAATTACCA TCTCGAACGT CGAGTTTGAA GGTCCCGAGC TCGTTATCTA CACCGACGAT
CCGAAACTGT TTGCCGATCA GGCAGACCTG ATAAAAATAC TGGCACGCGA TCTCAGAAAG
CGGATCGTCG TGCGCCCGAA TATCCTTGAA GACCCGGAGC GGGCCGCCCA GGAGATCCGG
GCGGTCGTGC CGGAGAACGC GGGGATCACC GACCTCTTCT TCGACCCGGA GACCGGCGAG
GTCCTGATCG AGGCGGAGAA GCCCGGTGTG GTCATCGGCA AGAACGGGGT AACCCTCCGG
GAGATCACGA AACAGATCGG CTGGACGCCG AAGGTTGTCC GGACGCCGCC CATCGAGAGC
ACGACGGTGA AGCAGATCCG TACCTATCTC CGGTCGGTGA AGGACGAGCG CAAAGCATTT
CTGCGGGCGA TCGGCCGCCG CATCCACCGT GAGGTCACGA GCAAAGACCA GTGGCTGCGG
GTCACGACGC TCGGGTGCTG CCGCGAGGTC GGCCGCGCTG CGTTCCTGAT ATCGACACCG
GAGAGCAAGA TCCTGGTCGA CTGCGGCGAA AAGCCGGGCA GCACCACGAA CGGGACGCCG
TACCTCTATG TGCCCGAGAT CTACCCGCTC AACACGCTCG ATGCAGTGGT GCTCACCCAC
GCGCACCTCG ACCACTGCGC CCTCGTCCCG CTCCTGTATA AGTACGGTTA CGAAGGCCCG
GTCTACTCGA CGGCGCCGAC GAGGGATCTC TCGACGATGC TCCAGCTCGA CTACCTGGAC
GTCGTCAGAA AGGAGACGGA CAGGATCCCC TACACCTCGA ACGAGGTGCG GACCTACATG
AAACACTCCA TCACCCTCAA CTACGGCAGC GTGACCGACA TCGCACCCGA CGTCAAACTC
ACCTTCCATA ACGCGGGGCA TATCCTCGGG TCGGCCATCG CGCACTTCCA TATCGGCGAG
GGGCTCTACA ACATCGCGTT CACCGGCGAC TTCAACTACC AGAAGTCACG GCTGTTCTCC
CCGGCGGTCT CGTCCTTCCC GCGGCTCGAG GCGCTCTTCA TGGAGAGCAC CTACGGCGGG
TCGAACGACT TCCAGCCCCA GAGGAAAGAG GCGGAGGACA AGCTCTACGA GACGGTTTCG
ACGACGATCA AGCGCGGCGG CAAGGTGATC ATTCCCGCGT TCGCCGTCGG GCGGTCGCAG
GAGGTCATGC TCGCCCTCGA GGAGGGTATC CGGCGGCAGA AGATCCCGCC GGTCAAGATC
TACCTCGACG GCATGATCAA GGAAGCGACG GCGATCCACA CGACCTACCC GGAGTACCTT
AACAGCGATC TCCGAAACCA GATCTTCCGC GAAGGACTGA ACCCCTTCCT CTCCGAGGCG
TTCGTCCAGG TGGACTCGCC GGCCATCCGT GAGAAGGTGG TAACGGGCGA TCCCTGCGTC
ATCATCACGA CGAGTGGTAT GTTAAACGGC GGGCCGGTGA TGGAGTACCT CAAGGCTCTC
GGCCCCGACG AGCGCAACTC GCTCATCTTC GTCGGCTACC AGGCGGACGG GACGCTCGGG
CGGCGCATCC AGAAGGGCTG GCGCGAGATC CCGCTCGGCT GGCGCGAGAC GATCGTGATC
AACCTCGAGA TCGCGACGAG CGACGGGTTC TCCGGTCACT CCGACCGCAA ACAGTTGATG
AACTACGTTG CTCACCTTCA GCCGCGCCCG GAGAAGATCT TCACCATCCA CGGCGACGAG
AACAAGACCA TCGACCTTGC AAGTTCCATC TACAAGCGCC ACCGTATCGA GACGCATTCT
CCCATGAACC TTGAGACGTA TCGTATGATC TAG
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| Protein sequence | MVIEEKLQEL KEQINKIVPG GITISNVEFE GPELVIYTDD PKLFADQADL IKILARDLRK
RIVVRPNILE DPERAAQEIR AVVPENAGIT DLFFDPETGE VLIEAEKPGV VIGKNGVTLR
EITKQIGWTP KVVRTPPIES TTVKQIRTYL RSVKDERKAF LRAIGRRIHR EVTSKDQWLR
VTTLGCCREV GRAAFLISTP ESKILVDCGE KPGSTTNGTP YLYVPEIYPL NTLDAVVLTH
AHLDHCALVP LLYKYGYEGP VYSTAPTRDL STMLQLDYLD VVRKETDRIP YTSNEVRTYM
KHSITLNYGS VTDIAPDVKL TFHNAGHILG SAIAHFHIGE GLYNIAFTGD FNYQKSRLFS
PAVSSFPRLE ALFMESTYGG SNDFQPQRKE AEDKLYETVS TTIKRGGKVI IPAFAVGRSQ
EVMLALEEGI RRQKIPPVKI YLDGMIKEAT AIHTTYPEYL NSDLRNQIFR EGLNPFLSEA
FVQVDSPAIR EKVVTGDPCV IITTSGMLNG GPVMEYLKAL GPDERNSLIF VGYQADGTLG
RRIQKGWREI PLGWRETIVI NLEIATSDGF SGHSDRKQLM NYVAHLQPRP EKIFTIHGDE
NKTIDLASSI YKRHRIETHS PMNLETYRMI
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