Gene Memar_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1117 
Symbol 
ID4847738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand+ 
Start bp1098380 
End bp1099030 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content61% 
IMG OID640115805 
ProductB3/4 domain-containing protein 
Protein accessionYP_001047031 
Protein GI126179066 
COG category[S] Function unknown 
COG ID[COG3382] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.871418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATGC ATAAGGAGAT TCTCGCCACA TTCCCCGGCC TCTCGGTTGC AGAAGGCGAT 
GTCGGGCGGC TGTCGGTTCA GGAGAAGAGT CCGGCCCTAA ATGCCCTGAA AGACGAGACC 
GTCCGTCTGG CAAGAGAACG GTATACGCTC GAGCGGGTCA AGGATGAACC CCTTTTCAGG 
GCGTACAGGG ACTTCTTCTG GAGGGTGGGC GTCGATCCGA CCAAGACGCG GCCCGCCTCG 
GAAGCGCTTG TCCGAAGGAT CCTGGGCGGG AAGATGCTCC CGGCGATCAA CACCGCGGTG 
GATGCCTATA ATCTGGCCTC AATTCGCACC GGAATCCCCA TTGCGGCGTT CGACGCCGAT 
ACCCTGGGCG GGGAGCTCGT TATGAGGTTT GCAGAAGAGG GGGAAGCGTT CCTCGGCATC 
GGGATGGCCG CACCCGTCAC GCTCCATACG AACCAGGTTA TCCTGGCGGA TGAGGATGCG 
ATCGTCGCCG TCTACCCGTA CCGCGACTCG GATGCGACAA AGATCACCCT CGCCACAACG 
ACGGTGCACA TCGTGGCATG CGGCGTGCCG GAGATTGAGC GGGAGAAGGT GTGTTCGGCA 
TACGACCTGG CTGCTGCATA CCTTCAGGAA TACGCTTCAG TCCGGGGATG A
 
Protein sequence
MEMHKEILAT FPGLSVAEGD VGRLSVQEKS PALNALKDET VRLARERYTL ERVKDEPLFR 
AYRDFFWRVG VDPTKTRPAS EALVRRILGG KMLPAINTAV DAYNLASIRT GIPIAAFDAD 
TLGGELVMRF AEEGEAFLGI GMAAPVTLHT NQVILADEDA IVAVYPYRDS DATKITLATT 
TVHIVACGVP EIEREKVCSA YDLAAAYLQE YASVRG