| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1085 |
|---|
| Symbol | |
|---|
| ID | 4846708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1073326 |
|---|
| End bp | 1074507 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640115773 |
|---|
| Product | bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase |
|---|
| Protein accession | YP_001047000 |
|---|
| Protein GI | 126179035 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0269] 3-hexulose-6-phosphate synthase and related proteins
[COG1795] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03126] formaldehyde-activating enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.136979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCTCA TCGGTGAAGC ATTGGTTGGA GACGGCGCAG AACTTGCGCA CATAGATCTG
ATAATGGGAA ACAAAGAGGG CGCGGTAGGA CAGGCGTTTG CGAACTCCAT TTCGCAGCTC
TCGAAGGGAC ACACACCGCT CCTCGCGGTC GTCAGGCCGA ACCTGCCGAC GAAACCCTCG
ACGCTCATCA TCCCGAAGGT CACGTTAAAG AAAGAGTACC AGGTGAACCA GATGTTCGGG
CCCGTCCAGG CCGCGGTGGC GAAAGCGGTC GCCGACTCGA TCGAGGAGGG CGTCTTTGAG
GGGGTCGACA TCGAGGACAC CGTCATCATG GCGAGCGTCT TCGTTCACCC GACCGCACAG
GACTACAACA AGATCTACCG GTTCAACTAC GGCGCGATGA AACTCGCGCT CCGCCGGGCC
CTCGACCGGT TCCCCGACGT CGAGACGCTC CTGCACGAGA AGGACCGGGC GGCCCACGCG
GTCATGGGAT TCAAGGTCCA GCGGCTCTGG GACCCGCCGT ACCTCCAGGT CGCCATGGAC
CTCGTCGACA GGAACCACAT GAACAGGGTT CTCGACGAAC TGCCCCAGAA CGACCACCTG
ATCATCGAGG CGGGCACGCC CCTGATCAAG AAGTTCGGCC TCTCGATCAT CTCCGAGATC
CGCGAACGCC GCCCGAACGC GTTCATCGTC GCCGACCTCA AGACCCTCGA CACGGGCAAC
CTCGAGGCCC GGATGACCGC CGACGCCGGC GCCGACGCCG TCGTGATCTC CGGCCTCGCG
CCCATCTCCA CCATCGAGAA GGCGATCGAG GACACCCGCA AGACCGGCAT CTACACCGTC
ATCGACATGC TCAACGTCAA AGACCCCGTT GCCGTGGTCA AGCAGCTGAA GGTGAAGCCG
GACGTCGTGG AACTCCACCG CGGCATCGAC GTCGAGGATA CCGCCTACGC CTGGGGAGAC
ATCCCGGCGA TCAAGAAAGC CGGCGGCGAG CGGCTGCTGG TCGCGACCGC GGGCGGCATC
CGGCAGGGCG TCGTGAAGGA CGCGAGGAAG GCGGGCGCCG ACATCCTGGT CGTCGGCCGC
GCCATCACCG CGAGCAAGAA CATCCAGCAC GCGGCCGAAG AGTTCCTCGA GGAACTGAGC
ACCGAAGAGA TCGACCAGTT CCGCATCATG ACCGACTTCT GA
|
|---|
| Protein sequence | MYLIGEALVG DGAELAHIDL IMGNKEGAVG QAFANSISQL SKGHTPLLAV VRPNLPTKPS
TLIIPKVTLK KEYQVNQMFG PVQAAVAKAV ADSIEEGVFE GVDIEDTVIM ASVFVHPTAQ
DYNKIYRFNY GAMKLALRRA LDRFPDVETL LHEKDRAAHA VMGFKVQRLW DPPYLQVAMD
LVDRNHMNRV LDELPQNDHL IIEAGTPLIK KFGLSIISEI RERRPNAFIV ADLKTLDTGN
LEARMTADAG ADAVVISGLA PISTIEKAIE DTRKTGIYTV IDMLNVKDPV AVVKQLKVKP
DVVELHRGID VEDTAYAWGD IPAIKKAGGE RLLVATAGGI RQGVVKDARK AGADILVVGR
AITASKNIQH AAEEFLEELS TEEIDQFRIM TDF
|
|---|
| |