| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1062 |
|---|
| Symbol | |
|---|
| ID | 4846525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1049385 |
|---|
| End bp | 1049894 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640115750 |
|---|
| Product | GrpE protein |
|---|
| Protein accession | YP_001046977 |
|---|
| Protein GI | 126179012 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0506342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAGG ATACATCCGA ACCAAACGAG AAGCAACAGA ATCTCGCAAA CGAGGCGGAT
GCAGCATCTC CGGCGCTTGA AGAGCTGCAG AATGCATATG ACGACCTTAA CAGCCGTTAT
CTGCGCCTTG CGGCGGATTT CGACAACTAC CGCAAAAGAA TGGACCGGGA ACTCGACGCC
CGTACGACGT TCGCCATCGA GAATTTCGCG GTGGAGTTGC TCGAGGTCGT AGACAACTTC
GAGCGGGCGG AGAGAGCCGA GGGTGCAGGC CTCCCGGAAG GGATGGAGCA GATCAAGAAA
CTCTTCATGA CCATCCTCGA ACGGCACGGC ATCACACCCA TCGAATGCCG GAACCTTCCC
TTCGACCCCG AACGGCACGA GGCGATCGCC TACGTCCCTT CGGACGCCGG GGAAGGAACC
GTGATCGACG AGGCCGTCCG CGGATACTGT ATGCAGGACA AGGTCATCAG ATGCGCAAAA
GTCGTAGTAT CTAAAGGAAT GGAGGAATAA
|
|---|
| Protein sequence | MKEDTSEPNE KQQNLANEAD AASPALEELQ NAYDDLNSRY LRLAADFDNY RKRMDRELDA
RTTFAIENFA VELLEVVDNF ERAERAEGAG LPEGMEQIKK LFMTILERHG ITPIECRNLP
FDPERHEAIA YVPSDAGEGT VIDEAVRGYC MQDKVIRCAK VVVSKGMEE
|
|---|
| |