| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1045 |
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| Symbol | |
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| ID | 4846666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1029325 |
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| End bp | 1031391 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640115733 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001046960 |
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| Protein GI | 126178995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.77936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACA CTAATGGCAA ATTACGTTAC GTTCCCACAA CCTGCCCGTA CTGCGGCGTA
GGGTGCGGGC TCAATCTTGT GGTGAATGAA GGTAAGCTCG TGGGGGTCGA GCCCCTGAAG
AGAAGTCCGA TCAATGAGGG CAAACTCTGC CCCAAGGGAG CCACCTGCTG GGAGTTCGTG
CACAGCCCCG ACCGGCTGAC GAAACCCCTC ATCAAGAAGA ACGGTGAGTT CGTCGAGGCA
TCCTGGGACG AGGCTTACGA TCTCATCGCC TCGAAGTTCA AGGAGACCAG CGAGAAGTAC
GGGCCGAAAT CCCTTGGATT CCAGGTCTCG TGCCGTACTC CGAACGAAGA GTGCTACATC
ATGCAGAAAC TCGCGCGGGT GGCCTTCAAG ACCAACAACA TCGACAACTG CGCGCGTATC
TGCCACGGGC CGTCCGTCGC GGGGCTCTCG CTCTCGTTCG GCTCCGGGGC CGCGACGAAC
CCCTTCGAGG ACGTCCTGAA CGCCGACGTC ATCTTCATGA TCGGTGCGAA CACGATCGAG
GCGCACCCGC TTGCGGGCCG CAGGCTCGTC CAGGCCAAGA AGGCGGGCAA GAAGATCATC
GTCTGCGACC CGCGCTACAC ACCCACGGCG CGCCTGGCCG ATGAGTGGGT CCGCTACAAC
CCCTCGACCA ACATTGCCCT GATCAACTCG ATCATGTACT GGATCATCCA GGAGAACCTC
CACGACAAGG AGTTCATCGA GAAGAGGACG ACGGGATTCG AGGACCTGAA GAAGACCGTG
GAGAACTACG CGGACGTCGA GTCGATCACC GGCGTGCCGA CCGAGCGGGT CAAGGAGATC
GCCCGGATTT ACGCCGGCGC GAAGAACGCG GTGATCATCT ACTGCCTCGG CATCACGGAG
CTCTCGACCG GCACGGACAA CGTCCGGTCG CTCGGAAACC TCTCGATGCT CACCGGCAAC
GTGGGCAGAC CCGGAACCGG CGTCAACCCG CTCCGCGGCC AGAACAACGT CCAGGGCGCC
TGCGACATGG GTGCATACCC GAACGTCTTC TCCGGCTACC AGAAGTGCGA GGACGACACC
ATCCGCAAGC GCATGGAAGA ACTCTGGGGC GTCACCGGGC TTGCAAGCGA GTACGGCGTG
ACGCTGACCG AGCAGATCAC CCAGTGCGGC GACCCGATCA AAGCGATGTA TATCTTCGCG
TTGAACCCGG TCGTCTCCTA CCCCGACTCG AACCACGTCA TGCGGTCGCT TGAGAAACTC
GACTTCCTGG TCGTGCAGGA CATCTTCATG ACCGAGACGG CGAAATACGC CGACGTCATC
CTGCCCGGCG CATCCTTCGC CGAGAAGGAC GGGACGTTCA CCAGCGGCGA GCGGCGCATC
AACCGTGTAA GGAAGGCCGT GGAGCCTCCG GGCGAGGCGA AGGCCGACTG GGAGATCTTC
GTCGATCTCG CTCACAAACT CGGGCTCCAG GGATTCGACT TCAACTCCGC GGAAGATATC
TGGGACGACA TGCGGCGGGT CACCCCGTCG ATGGCCGGCG CCTCCTACGC AAGGATGGAG
AAGCCGGAGT CCGTGCACTG GCCCTGCCCC ACCGAGGAGC ACCCCGGAAC GCCGATCCTC
CACCGCGAGA AGTTCTCGTC GGCCGACGGC CTCGGGCACT TCTTCGGCAT CGAACACCGG
CCGCCCGCGG AGGTCGCCGA CGCCGAGTAT CCGTTCACCC TGATGACCGG ACGTCTGCTC
TTCCACTACC ACACCCGGAC CCAGACCGGC CGGGCGGAGC TCCTCCACCA CGAGGTGCCC
AACGGCTACG TGCAGATCAA CAACGAGGAT GCAGCGCGCC TGAAGATCCA GAACGGCGAG
ATGATCAAAC TCACCAGCAG GCGCGGCGAG GTCGAGACCA CCGCGAGGGT GACCGACGAG
GTCGCACCGG GCGTGCTGAT GATGGCGATG CACTTTGCGG ATGCGGCGGC GAACATGCTG
ACGAACACCG CGCTCGACCC GCTCTCCAAG ATGCCGGAGT TGAAGCACAG TGCTGTGAAG
GTCGAGAAGA TCACGGGGGT GCAGTAA
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| Protein sequence | MADTNGKLRY VPTTCPYCGV GCGLNLVVNE GKLVGVEPLK RSPINEGKLC PKGATCWEFV
HSPDRLTKPL IKKNGEFVEA SWDEAYDLIA SKFKETSEKY GPKSLGFQVS CRTPNEECYI
MQKLARVAFK TNNIDNCARI CHGPSVAGLS LSFGSGAATN PFEDVLNADV IFMIGANTIE
AHPLAGRRLV QAKKAGKKII VCDPRYTPTA RLADEWVRYN PSTNIALINS IMYWIIQENL
HDKEFIEKRT TGFEDLKKTV ENYADVESIT GVPTERVKEI ARIYAGAKNA VIIYCLGITE
LSTGTDNVRS LGNLSMLTGN VGRPGTGVNP LRGQNNVQGA CDMGAYPNVF SGYQKCEDDT
IRKRMEELWG VTGLASEYGV TLTEQITQCG DPIKAMYIFA LNPVVSYPDS NHVMRSLEKL
DFLVVQDIFM TETAKYADVI LPGASFAEKD GTFTSGERRI NRVRKAVEPP GEAKADWEIF
VDLAHKLGLQ GFDFNSAEDI WDDMRRVTPS MAGASYARME KPESVHWPCP TEEHPGTPIL
HREKFSSADG LGHFFGIEHR PPAEVADAEY PFTLMTGRLL FHYHTRTQTG RAELLHHEVP
NGYVQINNED AARLKIQNGE MIKLTSRRGE VETTARVTDE VAPGVLMMAM HFADAAANML
TNTALDPLSK MPELKHSAVK VEKITGVQ
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