| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1044 |
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| Symbol | |
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| ID | 4847280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1028086 |
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| End bp | 1029324 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640115732 |
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| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit |
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| Protein accession | YP_001046959 |
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| Protein GI | 126178994 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0606051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCAA AGGGAGATAT GGTATACGCC TGGACGACGA GCCCCGATAT CGCCAGCGTC
GCGGAGTGCG GCGGTGCGGT GACCGGACTG CTCAAGTATG CCCTGGAGAA CAAGATCGTC
GACGCAGTCC TCGCGGTGAA GAAGGGCGTG GACCTCTACG ATGCGGTCCC GACAATCATC
ACCGACCCGG CCGAGATCGG GCAGACAGCA GGCTCGCTCC ACTGTGGAAC GCTTCTGCTC
TCGAAACTGG TCAAGAAGTA CCTGGGCGGG GCCGAGGATA TGCGCCTTGC CGTGACGGTG
AAGGGCTGCG ACGCGATGGG CCTCTACGAG CTCGCGAAGC GCAACCAGGT CAACCTGGAC
AACCTTCTCA TGATCGGCGT CAACTGCGGC GGGTCCGTCA GCCCGGTCTC GGCCCGGAAG
ATGATCGCCG AGAAGTTCGG CATCGACCCG AACGACGTCG TCAAGGAGGA GATTGACAAG
GGCCAGTTCA TCATCGTCAC GAAGGACGGT CAGCACAAGG GCATCTCGAT GGACGAACTC
GAAGAGGAAG GCTACGGCCG CCGGTCGAAC TGCCGCCGCT GCAAGATGAA AGTCCCGCGC
CAGGCGGACC TCGCCTGCGG CAACTGGGGC GTCATCGGGG AGAAAGCCGG GAAGGCCACG
TTCGTCGAGG TCTGTTCCGA GAAGGGTGCT GATCTCCTGA GCAGGGCCGC GAAGGCCGGG
GCGATCGCCA CGGAGCCCGC GAACCCGAAG GGGATCGAGA TCCGCGGCAA GGTCGAGAAC
GCGATGCTGA AACTCGGCGA CAAGTGGCGG GCGAAATACT TCGAAGGGCT CGGCGAGGGC
AAGGAGCGCC TCCAGAAGAT AATGGAGGAC GCGTCCCGGT GCATCAAGTG CTACGCCTGC
ATCGAGAACT GCCCGATCTG CTACTGCGAA GAGTGCAGCA CGAAGAAAGA CTACCTGGTG
CCGCCGGGCG TGCTCCCCGT GCCGTTCATG TTCCACCTGA TCCGGTTCGC TCACGTGGCG
GACTCCTGTG TCAACTGCGG CCAGTGCGAG GAGAACTGCC CGATGGAGAT CGCGAACTCG
CTCTACATGC ACGCCCTGCA GACGGATATG GAGAGGATGT TCGGCCACAC CCCGGGTGTG
GACATGGAGC TCCCGGTGCT CGCGCTCGTC GAGGAGCAGG CGGAACGCCA GCGGCTCTCC
GCAACCGGCA GCGACCAGAT CTTCGACGTG TTTAAGTAA
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| Protein sequence | MAAKGDMVYA WTTSPDIASV AECGGAVTGL LKYALENKIV DAVLAVKKGV DLYDAVPTII
TDPAEIGQTA GSLHCGTLLL SKLVKKYLGG AEDMRLAVTV KGCDAMGLYE LAKRNQVNLD
NLLMIGVNCG GSVSPVSARK MIAEKFGIDP NDVVKEEIDK GQFIIVTKDG QHKGISMDEL
EEEGYGRRSN CRRCKMKVPR QADLACGNWG VIGEKAGKAT FVEVCSEKGA DLLSRAAKAG
AIATEPANPK GIEIRGKVEN AMLKLGDKWR AKYFEGLGEG KERLQKIMED ASRCIKCYAC
IENCPICYCE ECSTKKDYLV PPGVLPVPFM FHLIRFAHVA DSCVNCGQCE ENCPMEIANS
LYMHALQTDM ERMFGHTPGV DMELPVLALV EEQAERQRLS ATGSDQIFDV FK
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