| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1007 |
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| Symbol | |
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| ID | 4846046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 993895 |
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| End bp | 995262 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115694 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_001046922 |
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| Protein GI | 126178957 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGA TCACAATCAG CCCGGTGACC CGGATCGAGG GTCATGCAGG CGTCAGGATC
TACCTCAACG ACCAGGGGCA GGTCGACTCG GCCCACTTCC AGGTCGTGGA ACTGAGGGGG
TTCGAGAAGT TCCTTATCGG CGCTTCGATT GGGGAAGCAC CCCGTATAAC GCCCCGCATC
TGCGGGATAT GCCCTTCGGC ACACCACCTG GCCGCAGCGA AGGCGACCGA CCAGATCTTC
GGCGTCGAAC CGCCCGCGAC CGGGAAGAAA CTCCGGGAAC TCCTGAGCAT CGGGCAGTTC
ATCCACTCCC ACGCCCTTCA CTTCTTCATG CTCGCGGCTC CGGACTTCAT CCTGGGCCAC
GACGCACCGG CAGAGACGCG GAACGTCATC GGGCTTGCCC GCCACTCGCC GGATCTCGCG
AAGAAGGCGA TCGCGGTCCG GAAGTTCGGT CAGCGCCTGA CGGAAGCGGT CGGCGGCAAA
CCCATCCACC CGTCTAACGC GCTGCCCGGC GGGATGTCGA CGGCGCTCAC GGAAGGAAAG
AGAGCAGAAC TCGCCACCAT GGCGAATGAG GCGCTCGGGA TCGCGCGTGA AGGATGGGAT
CTCGCTCGCG GTCTCCTCGA CGGCGTCGAT ATGGAGTTCG GGGCCGTAAC GACCGGTTTC
CTGGGCATGG CCAACAACGG GGTCTACTCG ACCTACGAAG GGCCTGCTAT GATGCTCGGG
CCGGACGGCG GTCAGCTCGG TTCGTTCTCG GGTCAGGACT ACACGAACTT CATCGAGGAG
TACTCGGAGG ACTGGTCGTA CCTGAAGTTC GCCCGGTTCA AAGGCGGAGA CTATTACCGG
GTCGGGCCGC TCGCCCGGCT CAACATCGTG CAGAAGATGG GCACGGAGCA CGCGGACGCC
GCTCTCGCGG AGTACCGCGA GCGGTTCGGC ACCGTCACCC AGGCCACGCT GGCATACAAC
CTGGCGCGCT ACATCGAGTT CATCGCCTCG TGCGAGCGGG CCGTCCAGTT GCTCTCCGAC
CCGGGCATCA CCGGATCAGA CATCCGGACG CCGGTGGGAG CGGTCGTGAA CCGCCGGGGT
GTCGGGATCA TCGAAGCGCC CCGGGGAACC CTGATCCACG ACTATTCCGT CGATGAAAAC
GGTATCATCG AGCGGTGCAA CCTGATCGTG GCGACCTGCC AGAACAACTA CGGGATGGAC
CGCGGCGTGG AGGATATGGC ACGCCGGGTG GTGGAGAACG GAGCGTTGAC CGATGGGGCA
GCAAACCGGA TCGAGATGAT CATCAGGGCG TATGACCCCT GTATTTCGTG CGCGACGCAC
GCGATCGGGA GAATGCCCCT CAAGATCGAG TGCGTTCGGA GAACATAG
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| Protein sequence | MKEITISPVT RIEGHAGVRI YLNDQGQVDS AHFQVVELRG FEKFLIGASI GEAPRITPRI
CGICPSAHHL AAAKATDQIF GVEPPATGKK LRELLSIGQF IHSHALHFFM LAAPDFILGH
DAPAETRNVI GLARHSPDLA KKAIAVRKFG QRLTEAVGGK PIHPSNALPG GMSTALTEGK
RAELATMANE ALGIAREGWD LARGLLDGVD MEFGAVTTGF LGMANNGVYS TYEGPAMMLG
PDGGQLGSFS GQDYTNFIEE YSEDWSYLKF ARFKGGDYYR VGPLARLNIV QKMGTEHADA
ALAEYRERFG TVTQATLAYN LARYIEFIAS CERAVQLLSD PGITGSDIRT PVGAVVNRRG
VGIIEAPRGT LIHDYSVDEN GIIERCNLIV ATCQNNYGMD RGVEDMARRV VENGALTDGA
ANRIEMIIRA YDPCISCATH AIGRMPLKIE CVRRT
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